Pairwise Alignments

Query, 359 a.a., norspermidine sensor from Vibrio cholerae E7946 ATCC 55056

Subject, 359 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score = 69.7 bits (169), Expect = 1e-16
 Identities = 76/364 (20%), Positives = 157/364 (43%), Gaps = 36/364 (9%)

Query: 15  IKRFLSLMVLNTVCYQASALELNVYLWEDTIAPSVVEAWHKKTGVSVNLFHFDNDDERSL 74
           ++ FL   ++      ++A  + +Y W   +AP  ++ + + +G+      +D+++    
Sbjct: 1   MRTFLLAPLMLAASVASAAETVKIYNWSSYVAPDTLKNFQQASGIVPTYDVYDSNETLDG 60

Query: 75  LMLKSVQLPFDIMVLDN--VSAFIFSRQNVFEDLTALPNRANNDPMWLQAC------GTH 126
            ++      +D++   N  ++  I  +     D + LPN  N +P+ L+A         +
Sbjct: 61  KLMTG-NSGYDVVFPSNHFMARQIQGKALKRLDKSKLPNWHNLNPVLLKALEVNDPGNQY 119

Query: 127 AVPYFWGSVGIAY-----RKSLFDKPPTQWSEVVDIAPAHRGR-----VGMLKDSVETLL 176
             PY WGS GI Y     +  L D  P    +++   P +  +     V +L +  E L 
Sbjct: 120 GFPYLWGSTGIGYNIDKVKAVLGDNAPVDSWDLI-FKPEYMSKLKSCGVAVLDNGPELLP 178

Query: 177 PALYMLNASPITDSIDTLRQAYRLLDAANPHILTYEYVLSYVRSHPQTDNLH-----MAV 231
            AL+ L     +       +A  LL    P+I       SY  S   T +L      + V
Sbjct: 179 IALHYLGLPHHSQDPKDYEKAKDLLMKVRPYI-------SYFHSSKYTGDLANGDICVVV 231

Query: 232 SYSGDHYSL----NRFFNTQDWDFSVPEGRPYLWVDCMAVNSVSPNTVQAKAFLDFLMKP 287
            +SGD        +   N     +S+P+    +W D +A+   +P+     A++++L++P
Sbjct: 232 GFSGDVLQAKNRADEANNGVKVGYSIPKEGAPMWFDMVAMPVDAPDEKAGYAYMNYLLQP 291

Query: 288 DIAAINAEYIRAASPNYKARALLPVEHREDLSIYLPEQRLAEGIIDSELSAKNLSLRAKI 347
           ++ A  + +++ A+ N KA  L+    + +  IY  ++ + +      + AK   +R +I
Sbjct: 292 EVMANISNHVQYANGNLKADGLVDPAMKGNTMIYPSDEVMGKLYALEAMPAKIDRIRTRI 351

Query: 348 ISSV 351
            +S+
Sbjct: 352 WTSI 355