Pairwise Alignments

Query, 359 a.a., norspermidine sensor from Vibrio cholerae E7946 ATCC 55056

Subject, 365 a.a., Spermidine-binding periplasmic protein SpuE from Pseudomonas sp. RS175

 Score = 95.1 bits (235), Expect = 3e-24
 Identities = 87/329 (26%), Positives = 154/329 (46%), Gaps = 25/329 (7%)

Query: 32  SALELNVYLWEDTIAPSVVEAWHKKTGVSVNLFHFDNDDERSLLMLKSVQLPFDIMVLDN 91
           +A  +++Y W D I  S +  + K TG+      FD+++     +L   +  +D++V  N
Sbjct: 25  AASTVHIYNWSDYIGESTLADFEKTTGIKPVYDVFDSNETLEGKLLAG-RTGYDVVVPSN 83

Query: 92  VSAFIFSRQNVFE--DLTALPNRANNDPMWLQAC------GTHAVPYFWGSVGIAY---- 139
                  +   F+  D   LPN AN DP  L+          +AVPY WG+ GI Y    
Sbjct: 84  HFLGKQIKAGAFQKLDKAQLPNYANLDPSLLKRLERNDPGNQYAVPYLWGTNGIGYNVEK 143

Query: 140 -RKSLFDKPPTQWS---EVVDIAPAHRGRVGMLKDSVETLLPA-LYMLNASPITDSIDTL 194
            +  L  +    W+   E  +I       V  L DS + ++PA L  L   P +++ +  
Sbjct: 144 IKAVLGVEKIDSWAVLFEPENIKKLSSCGVSFL-DSGDEMIPAMLNYLGLDPNSENPEDY 202

Query: 195 RQAYRLLDAANPHILTYEYVLSYVRSHPQTDNLHMAVSYSGDHYSLNRFFNTQ----DWD 250
           ++A   L    P++ TY     Y+ S      + +A  +SGD +      +      +  
Sbjct: 203 KKAEAQLLKIRPYV-TYFNSSKYI-SDLANGEICVAAGFSGDIFQARERASEAGKGVEIA 260

Query: 251 FSVPEGRPYLWVDCMAVNSVSPNTVQAKAFLDFLMKPDIAAINAEYIRAASPNYKARALL 310
           + +P+    LW D +A+   + N  QA AF++FL++P++ A  ++Y+  A+PN KA  L+
Sbjct: 261 YVIPKEGGNLWFDMLAIPRDATNVKQAHAFINFLLQPEVIAKVSDYVGYANPNPKAGELM 320

Query: 311 PVEHREDLSIYLPEQRLAEGIIDSELSAK 339
             + R D ++Y P+  + +  ++SEL  K
Sbjct: 321 DQQVRTDEAVYPPQAVVDKLYVNSELPPK 349