Pairwise Alignments

Query, 359 a.a., norspermidine sensor from Vibrio cholerae E7946 ATCC 55056

Subject, 369 a.a., polyamine ABC transporter substrate-binding protein from Magnetospirillum magneticum AMB-1

 Score = 66.6 bits (161), Expect = 1e-15
 Identities = 79/317 (24%), Positives = 136/317 (42%), Gaps = 27/317 (8%)

Query: 36  LNVYLWEDTIAPSVVEAWHKKTGVSVNLFHFDNDDERSLLMLKSVQLPFDIMVLDNVSAF 95
           LNVY W D IAP  +E +   TG+ VN   +D+++      L++ +  +D+ V  + S F
Sbjct: 31  LNVYNWSDYIAPDTLEKFTALTGIKVNYDVYDSNEVLQA-KLQAGKSGYDV-VFPSASPF 88

Query: 96  IFS--RQNVFE--DLTALPNRANNDPMWLQACGT-------HAVPYFWGSVGIAYR---- 140
           + +  +  ++   D + L N  N D   +            +A+PY     G AY     
Sbjct: 89  LANQIKAGIYRKLDRSKLSNYGNLDAQVMVTLNRAADPGNLYAIPYAISPTGFAYNVDKV 148

Query: 141 -KSLFDKPPTQWSEVVDIAPAHRGR---VGMLKDSVETLLPALYMLNASPITDSIDTLRQ 196
            K+  D P   W+ + D A   + +   V +L    E    AL  L  +  +     L+ 
Sbjct: 149 AKAGKDMPLDSWAALFDPAQVAKLKGCGVSLLDAPTEVFPAALTYLGKNGASLDSADLKA 208

Query: 197 AYRLLDAANPHILTYEYVLSYVRSHPQTDNLHMAVSYSGDHY-SLNRFFNTQ---DWDFS 252
           A   +    P I  Y +   ++      D + MA  Y GD   S NR        +    
Sbjct: 209 AAEAVTKVRPSI-KYFHSSKFINDLANGD-ICMAHGYVGDLVQSRNRAAEAGKGVNIKIV 266

Query: 253 VPEGRPYLWVDCMAVNSVSPNTVQAKAFLDFLMKPDIAAINAEYIRAASPNYKARALLPV 312
           +P+    + +D M + + +P+   A  F+DF+MK ++AA  +      +P   +R+L+  
Sbjct: 267 IPKEGAVINIDSMVIPADAPHPENAHKFIDFMMKQEVAAGFSNTTGYGNPIPGSRSLIRK 326

Query: 313 EHREDLSIYLPEQRLAE 329
           E +ED  I+  EQ  A+
Sbjct: 327 EIQEDPVIFPSEQVTAK 343