Pairwise Alignments

Query, 359 a.a., norspermidine sensor from Vibrio cholerae E7946 ATCC 55056

Subject, 371 a.a., Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 88.2 bits (217), Expect = 3e-22
 Identities = 92/330 (27%), Positives = 150/330 (45%), Gaps = 33/330 (10%)

Query: 20  SLMVLNTVCYQASALELNVYLWEDTIAPSVVEAWHKKTGVSVNLFHFDNDDE-RSLLMLK 78
           +LMV++     A    L++Y W D IAP  V  + K+TG++V    FD+++     LM  
Sbjct: 17  ALMVVSVGTLAAEQKTLHIYNWSDYIAPDTVANFEKETGINVIYDVFDSNEVLEGKLMAG 76

Query: 79  SVQLPFDIMVLDNVSAFIFSRQ---NVFE--DLTALPNRANNDPMWLQACGTH------A 127
           S    FD++V    SA    RQ    VF+  D + LP   N DP  L+    H      A
Sbjct: 77  STG--FDLVV---PSASFLERQLTAGVFQPLDKSKLPGWKNLDPELLKLVAKHDPDNKYA 131

Query: 128 VPYFWGSVGIAYR----KSLF--DKPPTQWSEVV---DIAPAHRGRVGMLKDSVETLLPA 178
           +PY W + GI Y     K++   D P   W  V+   ++       V  L    E     
Sbjct: 132 MPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATV 191

Query: 179 LYMLNASPITDSIDTLR-QAYRLLDAANPHILTYEYVLSYVRSHPQTDNLHMAVSYSGDH 237
           L  L   P +   D     A  LL    P+I  Y +   Y+      D   +A+ ++GD 
Sbjct: 192 LNYLGKDPNSSKADDYTGPATDLLLKLRPNI-RYFHSSQYINDLANGDTC-VAIGWAGDV 249

Query: 238 Y-SLNRFFNTQDW---DFSVPEGRPYLWVDCMAVNSVSPNTVQAKAFLDFLMKPDIAAIN 293
           + + NR    ++     FS+P+     + D  A+ + + N  +A  FL++L++PD+ A  
Sbjct: 250 WQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAKNKDEAYQFLNYLLRPDVIAHI 309

Query: 294 AEYIRAASPNYKARALLPVEHREDLSIYLP 323
           ++++  A+ N +A AL+  + R++  IY P
Sbjct: 310 SDHVFYANANKEATALVSQQVRDNPGIYPP 339