Pairwise Alignments

Query, 359 a.a., norspermidine sensor from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., Spermidine/putrescine-binding periplasmic protein from Enterobacter asburiae PDN3

 Score = 83.2 bits (204), Expect = 9e-21
 Identities = 70/305 (22%), Positives = 136/305 (44%), Gaps = 19/305 (6%)

Query: 36  LNVYLWEDTIAPSVVEAWHKKTGVSVNLFHFDNDDERSLLMLKSVQLPFDIMVLDNVSAF 95
           L  Y W + + P ++E + K+TG+ V    +++++     +       +D++V       
Sbjct: 25  LYFYNWTEYVPPGLLEQFTKETGIKVIYSTYESNETMYAKLKTYKDGAYDLVVPSTYFVD 84

Query: 96  IFSRQNVFE--DLTALPNRANNDPMWLQAC----GTHAVPYFWGSVGIAYRKSLFD-KPP 148
              ++ + +  D T L + +N DP  L         +++PY WG+  I       D K  
Sbjct: 85  KMRKEGMIQKIDKTKLTHFSNLDPEMLNKPFDPNNDYSIPYIWGATAIGVNSEAVDPKTV 144

Query: 149 TQWSEVVDIAPAHRGRVGMLKDSVETLLPALYMLNASPITDSIDTLRQAYRLLDAANPHI 208
           T W+++    P ++G + +  D+ E    AL  L  S  T     +  AY  L    P++
Sbjct: 145 TSWADLWK--PEYKGSLLLTDDAREVFQVALRKLGYSGNTTDPKEIEAAYAELKKLMPNV 202

Query: 209 LTYEYVLSYVRSHPQTDN-LHMAVSYSGDHYSLNRFFNTQD--WDFSVPEGRPYLWVDCM 265
             +    S   ++P  +  +++ + ++G  Y   +     +  W    P+     W+D +
Sbjct: 203 AAFN---SDNPANPYMEGEVNLGMVWNGSAYVARQAGTPLEVVW----PKEGGIFWMDSL 255

Query: 266 AVNSVSPNTVQAKAFLDFLMKPDIAAINAEYIRAASPNYKARALLPVEHREDLSIYLPEQ 325
           A+ + + N   A   ++FL++PD+A   AE I   +PN  AR LL  E   D S+Y   +
Sbjct: 256 AIPANAKNVEGAHKLINFLLRPDVAKQVAETIGYPTPNLAARRLLKPEVANDKSLYPDAE 315

Query: 326 RLAEG 330
            +++G
Sbjct: 316 TISKG 320