Pairwise Alignments

Query, 359 a.a., norspermidine sensor from Vibrio cholerae E7946 ATCC 55056

Subject, 369 a.a., spermidine/putrescine ABC transporter substrate-binding protein PotF from Dickeya dianthicola 67-19

 Score = 90.1 bits (222), Expect = 8e-23
 Identities = 92/329 (27%), Positives = 150/329 (45%), Gaps = 33/329 (10%)

Query: 21  LMVLNTVCYQASALELNVYLWEDTIAPSVVEAWHKKTGVSVNLFHFDNDDE-RSLLMLKS 79
           LM+  +V   A    L+VY W D IAP  +E + K++G++V    FD+++     LM  S
Sbjct: 16  LMMAASVTASAEEKTLHVYNWSDYIAPDTLENFQKESGINVVYDVFDSNEVLEGKLMAGS 75

Query: 80  VQLPFDIMVLDNVSAFIFSRQ---NVFE--DLTALPNRANNDPMWLQACGTH------AV 128
               FD++V    SA    RQ    VF+  D + LPN  N DP  ++    H      AV
Sbjct: 76  TG--FDLVV---PSASFLGRQISAGVFQPLDKSKLPNYKNLDPELMKLIEEHDPGHKYAV 130

Query: 129 PYFWGSVGIAYR----KSLF--DKPPTQWSEVV---DIAPAHRGRVGMLKDSVETLLPAL 179
           PY W + GI Y     K++   D P   W  V+   ++       V  L    E     L
Sbjct: 131 PYLWATTGIGYNVDKVKAILGKDAPVNSWDLVLKPENLEKLKSCGVAFLDAPAEIYATVL 190

Query: 180 YMLNASPIT-DSIDTLRQAYRLLDAANPHILTYEYVLSYVRSHPQTDNLHMAVSYSGD-H 237
                +P + +  D  + A  LL    P +  Y +   Y+      D + + + ++GD  
Sbjct: 191 NYQGKNPNSANESDYTKDATDLLLKLRPSV-RYFHSSQYINDLANGD-ICVTIGWAGDVM 248

Query: 238 YSLNRFFNTQDW---DFSVPEGRPYLWVDCMAVNSVSPNTVQAKAFLDFLMKPDIAAINA 294
            + NR  + ++     +S+P+     + D  A+   + N   A  FL++L+KPD+ A  +
Sbjct: 249 QAANRAKDAKNGVNISYSIPKEGALAFFDVFAIPKDAKNLDSAYQFLNYLLKPDVIANVS 308

Query: 295 EYIRAASPNYKARALLPVEHREDLSIYLP 323
            ++  A+PN +A AL+  E R + +IY P
Sbjct: 309 NHVYYANPNKEATALVKEEVRNNPNIYPP 337