Pairwise Alignments

Query, 648 a.a., murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 642 a.a., lytic transglycosylase from Pseudomonas simiae WCS417

 Score =  288 bits (736), Expect = 7e-82
 Identities = 195/637 (30%), Positives = 300/637 (47%), Gaps = 10/637 (1%)

Query: 12  LVSILMFTTVWAVGSASASTLDLEAQRAQYDKAQRWLDEKNVAQYQRIRKQIDSYPLTPY 71
           L + L    + A    SA  +DL  QR  YD+A+R L + +   Y +  + +  YPLTPY
Sbjct: 5   LFNFLSCLLLSATAVQSAQAVDLTTQRQYYDEAKRALAKGDTGPYMQYSQALADYPLTPY 64

Query: 72  LDYRAFLIDLGSKPPIAVRNFIDSHKEYPFSARIAAPYLDALARSKKWSALLQFQTQLPN 131
           L Y      L +     +  F+  + + P +  +   +L  LA    W    ++     N
Sbjct: 65  LAYDELTARLKTASNQEIEQFLAKNGDLPQANWMKLRWLRWLAERGDWQTFEKYYDAKLN 124

Query: 132 GETYQCHYYNAKLQTGKRNEAFEGAKKLWLNGASIADACDPLFAEWDRVGGLSDDWVLKR 191
                C +   +L    + E ++ A+KLW+ G S   ACD  F +W   G L++  +  R
Sbjct: 125 FVELDCLHGQFQLTHNLKAEGYKTAEKLWMTGKSQPAACDVTFGQWAADGQLTEQKIWDR 184

Query: 192 ALLAFEGRNRNLIVYLQKKLDGKKSQAKAQGMLELFDKPERVLAYSRKASQDPINQKLAE 251
           A LA E RN  L   L K L    +Q +   M+++  KP+ +   SR             
Sbjct: 185 AKLAAEARNYALANSLVKTLPTLGAQGRL--MVDVAQKPDMLSDPSRFLPATEAMSDAVG 242

Query: 252 LALQKWARSEPQEAQAVFNDVAKAQGWNQEQKGRVARFIAIRLMDTEEAAIAKWRDEVTR 311
           L L++ AR +P +A A+ +  A +  +++++K  +AR I + L    +    +   +   
Sbjct: 243 LGLRRLARQDPDKAMALLDGYASSMHFSRDEKVSIAREIGLTLAKRYDPRALEVMTKYDP 302

Query: 312 TSQDVRLIEARIRLALRENDWRGLSQWIAVLPEQERKTLRWQYWQGRS-EIALGKKKEGT 370
             +D  + E R+RL LR   W    Q    LP+    T RW+YWQ RS E+A  K  +  
Sbjct: 303 ELRDNTVSEWRLRLLLRLARWEDAYQLTRKLPQDLATTNRWRYWQARSLELAEPKNPQAL 362

Query: 371 ERLKALLGQRSFYSVAAAKILQQSVNYPTSTVTLDMKQIKAHK----KALARIDELIALD 426
              K L  +R FY   AA   +    Y      L M Q    K      + R  E  A  
Sbjct: 363 VLYKHLAQERDFYGFLAAD--RSKAPYQLKNKPLLMSQALVSKVRNTPGVRRALEFYARG 420

Query: 427 KVPAAKSEWRWLLDRVSQKEKEMLAAYAADSGWYQMTIAATISASLWDNNQLRFPVVHQN 486
           +V   + EW  +    ++ E    A  A D  WY   I     A  WD+  +RFP+ H++
Sbjct: 421 QVVDGRREWYHVSRHFNRDEMVAQAKLAYDMKWYFPAIRTISQAQYWDDLDIRFPMAHRD 480

Query: 487 LFTLHGRKNGVDPITLMSLARQESALNPDAQSPVGARGLMQIMPDTARYTARKYQLSYSN 546
                 +  G+    + ++ RQESA   DA+S VGA GLMQ+MP TA+ TARK+ +  ++
Sbjct: 481 TLVREAKVRGLHSSWVFAITRQESAFMDDARSGVGASGLMQLMPGTAKETARKFSIPLAS 540

Query: 547 PDELYQVGKNIEIGSRYLSSLLERYDQNRILAFAAYNAGPSRVDSWLKRSQGKLDAYGFI 606
           P ++    KNI++G+ YLS +  +++ NR+LA AAYNAGP RV  WL R    L    ++
Sbjct: 541 PAQVLDPDKNIQLGAAYLSQVHSQFNGNRVLASAAYNAGPGRVRQWL-RGADHLSFDVWV 599

Query: 607 EAIPFAETRGYVQNILMFETYYRDLMGVQGRFLNEHE 643
           E+IPF ETR YVQN+L +   Y   +      ++ HE
Sbjct: 600 ESIPFDETRQYVQNVLSYSVIYGQKLNSPQPLVDWHE 636