Pairwise Alignments

Query, 648 a.a., murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 676 a.a., Soluble lytic murein transglycosylase (EC 4.2.2.n1) from Variovorax sp. SCN45

 Score =  157 bits (396), Expect = 2e-42
 Identities = 179/667 (26%), Positives = 286/667 (42%), Gaps = 56/667 (8%)

Query: 8   KPRSLVSILMFTTVWAVGSASASTLDLEAQRAQYD----KAQRWLDEKNVAQYQRIRKQI 63
           +PRS    L+F+ V A+ +A  S     AQ    D    + ++     + A+   +  Q 
Sbjct: 13  RPRSAPPALVFSAVLAL-AALLSQQPAAAQNNTNDDVLIQMKQAFQRGDKARLSALLPQA 71

Query: 64  DSYPLTPYLDYRAFLIDLGSKPPIAVRNFIDSHKEYPFSARIAAPYLDALARSKKWSALL 123
             + L P+  Y      L    P  V++F   +       R+   +L    + + W    
Sbjct: 72  RGHALEPWAAYWELKARLSEASPNEVQDFFARYAGTYQEDRLRNDWLLLTGQRRDWDNFS 131

Query: 124 QFQTQLPNGETYQCHYYNAKLQTGKRNEAFEG-AKKLWLNGASIADACDPLFAEWDRVGG 182
                   G+  Q   Y   + T +   A +  A ++  N  +  DA D      DR+  
Sbjct: 132 ASIAGFRMGDDAQVRCYATLVDTLRSGTATQAQADEVRRNWFAQKDADDGCLTASDRMVA 191

Query: 183 L-----SDDWVLKRALLAFEGRNRNLIVYLQKKLDGKKSQAKAQGMLELFDKPERVLAY- 236
                 +D W  K+A LA E           +   G  + A A   L LF++     A  
Sbjct: 192 ARLMTPADAW--KKARLAMEANR-------PQAARGAVTIA-APDALPLFEELNASSAKF 241

Query: 237 --SRKASQDPINQKLAELALQKWARSEPQEAQAVFNDV------AKAQGWNQEQKGRVAR 288
              R        ++L  LAL K A ++P  A +  +        A+ + W     G + R
Sbjct: 242 LTGRAFVAAKSRKELVVLALIKVAIADPDLAASQLDSKWGPMLSAEERNWLW---GTIGR 298

Query: 289 FIAIRLMDTEEAAIAKWRDEVTRTSQ-DVRLIEARIRLALRENDWRGLSQWIAVLPEQER 347
             A +L        A     VT+ S     ++  R+R ALR   W+ ++  I  + E  +
Sbjct: 299 QAAGKLSPQAGGYFAN----VTKNSDLSDDMLGWRVRAALRAGQWKEVAPAINAMSESAQ 354

Query: 348 KTLRWQYWQGRSEIALG---KKKEGTERLKALLGQRSFYSVAAAKILQQSVNYPT--STV 402
               W YW+ R+    G   ++ +  E  +++ G R FY + A + L Q    PT  + +
Sbjct: 355 LDPTWVYWKARALANNGSEERRAQARELYQSIAGSRGFYEMLALEELGQRTVVPTRPAPL 414

Query: 403 TLDMKQIKAHKKALARIDELIALDKVPAAKSEWRW---LLDRVSQKEKEMLAAYAADSG- 458
           T + K       +LAR    IA+   P    EW +   L D+    ++ +LAA  AD   
Sbjct: 415 TPEEKATARANPSLARGLYAIAIGLRPEGTREWNYATNLHDKGGMDDRALLAA--ADFAC 472

Query: 459 ----WYQMTIAATISASLWDNNQLRFPVVHQNLFTLHGRKNGVDPITLMSLARQESALNP 514
               W +    +  +  + D +Q RFP+   +      +  G+DP  +  L RQES    
Sbjct: 473 QREVWDRCINTSERTKGVVDVDQ-RFPMPFHDTVLRKSQDIGLDPAYVYGLIRQESRFIM 531

Query: 515 DAQSPVGARGLMQIMPDTARYTARKYQLSYSNPDELYQVGKNIEIGSRYLSSLLERYDQN 574
           DA+S VGA GLMQ+MP TAR+TARK  L+  +P+++     NI IG+ YL   L+ +D +
Sbjct: 532 DARSGVGASGLMQVMPATARWTARKIGLTDFSPNQINDRETNITIGTNYLKLALDDFDGS 591

Query: 575 RILAFAAYNAGPSRVDSWLKRSQGKLDAYGFIEAIPFAETRGYVQNILMFETYYRDLMGV 634
             LA AAYNAGP R  +W  R+   +DA  + E +PF+ETR YV+ +L   T Y  ++  
Sbjct: 592 MALAAAAYNAGPGRPRNW--RNGPVIDAAIWAENVPFSETRDYVKKVLANTTNYAAIISG 649

Query: 635 QGRFLNE 641
           + + L E
Sbjct: 650 RPQSLKE 656