Pairwise Alignments

Query, 558 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., Autolysin sensor kinase (EC 2.7.3.-) from Variovorax sp. SCN45

 Score = 92.0 bits (227), Expect = 3e-23
 Identities = 59/211 (27%), Positives = 103/211 (48%), Gaps = 6/211 (2%)

Query: 334 TINMSMAQGIA----QLLSSQILYGEYQQKQILLSRAEIKLLQAQVNPHFLFNALNTISA 389
           TI +  A G++     L  S+ +  + +  Q   + A +KLL+ Q+ PH LFN L  +  
Sbjct: 109 TITIIAAIGMSFFFYSLGKSKHMQSQIEVAQRNATEARLKLLETQLEPHMLFNTLANLRV 168

Query: 390 VIRREPDKARELILHLSQFFRSNLK-QNVETVTLREELAHVNAYLTIEKARFSDRLDVEI 448
           +I  +P +A  ++  L+ + R  L      +  L  E   +  YL +   R  DRL   +
Sbjct: 169 LITVDPPRAVAMLDRLNSYLRMTLSGSRALSHPLSAEFERLADYLELMSVRMGDRLHYTL 228

Query: 449 AIDDALLERNVPSFTLQPLVENAIKHGTSNLLEAGKVRIYSEVVEGGMRVVVED-NAGLY 507
            + ++L +  VP   LQPLVEN+I+HG    +E G++ + +    G + + V D   GL 
Sbjct: 229 ELPESLRDAPVPPLLLQPLVENSIRHGLEPKVEGGEITVRAREDAGQLVIEVSDTGVGLD 288

Query: 508 QPPSEDYDGLGMQIVEKRLTNKFGLKSGLQI 538
             P  +    G++ V +RL   +G +  L++
Sbjct: 289 AAPPSEGSSFGLEQVRERLATVYGAQGALRL 319