Pairwise Alignments

Query, 558 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 561 a.a., predicted sensory kinase in two-component system with YehT (NCBI) from Escherichia coli BW25113

 Score =  649 bits (1673), Expect = 0.0
 Identities = 320/553 (57%), Positives = 426/553 (77%), Gaps = 2/553 (0%)

Query: 2   DLILSLLQQMCVYLVLAYMLSKTPIFIPLLNISGRFDHKISVYVLFSLFCIMGTYFGLQI 61
           +L+L LLQQMCV+LV+A+++SKTP+FIPL+ ++ R  HK   Y++FS+FCIMGT+FGL I
Sbjct: 5   NLVLLLLQQMCVFLVIAWLMSKTPLFIPLMQVTVRLPHKFLCYIVFSIFCIMGTWFGLHI 64

Query: 62  NDAIANTRAIGAVMGGLFGGPVIGFAVGLTGGLHRYTLGGFTDLACAISTTAEGLIGGLL 121
           +D+IANTRAIGAVMGGL GGPV+G  VGLTGGLHRY++GG T L+C IST  EGL+GGL+
Sbjct: 65  DDSIANTRAIGAVMGGLLGGPVVGGLVGLTGGLHRYSMGGMTALSCMISTIVEGLLGGLV 124

Query: 122 HTYLLRKGKGKLLFSPSIVFAVTLFAEIVQMLIILVVAKPFEQSYALVSTIAAPMIIANS 181
           H+ L+R+G+   +F+P    AVT  AE+VQMLIIL +A+P+E +  LVS IAAPM++ N+
Sbjct: 125 HSILIRRGRTDKVFNPITAGAVTFVAEMVQMLIILAIARPYEDAVRLVSNIAAPMMVTNT 184

Query: 182 VGAALFMSILLDRKTIFEEYSATFSRRALNIAERSVGILAAGFNPENANKIARIVYEQTN 241
           VGAALFM ILLD++ +FE+Y++ FS  AL +A  + GIL  GFN  N+ K+A+++Y++ +
Sbjct: 185 VGAALFMRILLDKRAMFEKYTSAFSATALKVAASTEGILRQGFNEVNSMKVAQVLYQELD 244

Query: 242 VGAVSITDREKILAFVGIGDDHHKPNTPISSQSTLDAINRNAIIYLDGKEHPYQCSLSPT 301
           +GAV+ITDREK+LAF GIGDDHH P  PISS  TL AI    ++Y DG E PY+CSL P 
Sbjct: 245 IGAVAITDREKLLAFTGIGDDHHLPGKPISSTYTLKAIETGEVVYADGNEVPYRCSLHPQ 304

Query: 302 CKLGSALIIPLRA-GDRVIGTIKLYEPKRKLFSTINMSMAQGIAQLLSSQILYGEYQQKQ 360
           CKLGS L+IPLR    RV+GTIKLYE K +LFS+IN ++ +GIAQLLS+QIL G+Y++++
Sbjct: 305 CKLGSTLVIPLRGENQRVMGTIKLYEAKNRLFSSINRTLGEGIAQLLSAQILAGQYERQK 364

Query: 361 ILLSRAEIKLLQAQVNPHFLFNALNTISAVIRREPDKARELILHLSQFFRSNLKQNVETV 420
            +L+++EIKLL AQVNPHFLFNALNTI AVIRR+ ++A +L+ +LS FFR NLK+  E V
Sbjct: 365 AMLTQSEIKLLHAQVNPHFLFNALNTIKAVIRRDSEQASQLVQYLSTFFRKNLKRPSEFV 424

Query: 421 TLREELAHVNAYLTIEKARFSDRLDVEIAIDDALLERNVPSFTLQPLVENAIKHGTSNLL 480
           TL +E+ HVNAYL IEKARF  RL V IAI   L ++ +P+FTLQP+VENAIKHGTS LL
Sbjct: 425 TLADEIEHVNAYLQIEKARFQSRLQVNIAIPQELSQQQLPAFTLQPIVENAIKHGTSQLL 484

Query: 481 EAGKVRIYSEVVEGGMRVVVEDNAGLYQPPSEDYDGLGMQIVEKRLTNKFGLKSGLQIEV 540
           + G+V I +      + + +EDNAGLYQP + +  GLGM +V+KRL  +FG   G+ +  
Sbjct: 485 DTGRVAISARREGQHLMLEIEDNAGLYQPVT-NASGLGMNLVDKRLRERFGDDYGISVAC 543

Query: 541 APQEYTRMSFVIP 553
            P  YTR++  +P
Sbjct: 544 EPDSYTRITLRLP 556