Pairwise Alignments

Query, 558 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 561 a.a., sensor histidine kinase from Erwinia tracheiphila SCR3

 Score =  585 bits (1508), Expect = e-171
 Identities = 295/554 (53%), Positives = 396/554 (71%), Gaps = 2/554 (0%)

Query: 1   MDLILSLLQQMCVYLVLAYMLSKTPIFIPLLNISGRFDHKISVYVLFSLFCIMGTYFGLQ 60
           +DL+L LLQQMCV+LV+A+++SKT +  PL+ I+ R  HK+  YV FS+FCI+GT+  L 
Sbjct: 4   VDLVLLLLQQMCVFLVIAWLMSKTRLLTPLMQITVRLPHKLLCYVTFSVFCILGTFLSLH 63

Query: 61  INDAIANTRAIGAVMGGLFGGPVIGFAVGLTGGLHRYTLGGFTDLACAISTTAEGLIGGL 120
           I D++ANTRAIGA +GGL GGP+ G  +GLTGGLHRYTLGG T ++C IST AEG+IGGL
Sbjct: 64  IEDSLANTRAIGAAIGGLLGGPLTGGLIGLTGGLHRYTLGGMTAISCMISTLAEGVIGGL 123

Query: 121 LHTYLLRKGKGKLLFSPSIVFAVTLFAEIVQMLIILVVAKPFEQSYALVSTIAAPMIIAN 180
           L  +L+  G+   + SP     VTL  E+VQM IIL++A+PF+ +  LV  IA PM++ N
Sbjct: 124 LQRWLINTGRSDKVLSPLTAGCVTLLTELVQMAIILLIARPFQDALHLVKNIALPMVVTN 183

Query: 181 SVGAALFMSILLDRKTIFEEYSATFSRRALNIAERSVGILAAGFNPENANKIARIVYEQT 240
           S+GAA+FM ILLD++ +FE+Y+  FS  AL +A  + GIL  GFN EN++K+A+I+Y + 
Sbjct: 184 SLGAAMFMRILLDKRAMFEKYTPAFSAVALKVAASTEGILRMGFNEENSHKVAQILYSEL 243

Query: 241 NVGAVSITDREKILAFVGIGDDHHKPNTPISSQSTLDAINRNAIIYLDGKEHPYQCSLSP 300
             GAV+ITDREK+LAF GIG+DHH P   I+S  TL AI    ++Y DG E PY+CS+ P
Sbjct: 244 KTGAVAITDREKLLAFTGIGNDHHLPGEQIASSWTLRAIQTGEVVYTDGNETPYRCSIHP 303

Query: 301 TCKLGSALIIPLRA-GDRVIGTIKLYEPKRKLFSTINMSMAQGIAQLLSSQILYGEYQQK 359
            CKL S L+IPL     RVIGTIKLYE K +LFS+IN ++ +GIA+LLS+QIL G Y+Q+
Sbjct: 304 ACKLSSTLVIPLHGENQRVIGTIKLYEAKHRLFSSINRALGEGIARLLSAQILAGNYEQQ 363

Query: 360 QILLSRAEIKLLQAQVNPHFLFNALNTISAVIRREPDKARELILHLSQFFRSNLKQNVET 419
           + LL++AEI+LL A+VNPHFLFNALNT+ AVIRR+  +A +L+ +LS FFR NLK+  + 
Sbjct: 364 KALLAQAEIQLLHARVNPHFLFNALNTLLAVIRRDQQQAGQLVQYLSTFFRKNLKRPSQI 423

Query: 420 VTLREELAHVNAYLTIEKARFSDRLDVEIAIDDALLERNVPSFTLQPLVENAIKHGTSNL 479
           VTL +E  HV+AYL IEKARF   L V + I   L    +P+F+LQP+VENAIKHGTS L
Sbjct: 424 VTLTDETEHVDAYLNIEKARFQTSLTVRLDIPSTLSHFQLPAFSLQPIVENAIKHGTSQL 483

Query: 480 LEAGKVRIYSEVVEGGMRVVVEDNAGLYQPPSEDYDGLGMQIVEKRLTNKFGLKSGLQIE 539
              G++ I +      + + +EDNAGLYQ      +G+GM +V+KRL   FG   G+ I 
Sbjct: 484 SGQGEILIKAFKEAEHLILTIEDNAGLYQQQHHP-EGMGMALVDKRLRAHFGAGYGITIH 542

Query: 540 VAPQEYTRMSFVIP 553
             P  +TR+S  +P
Sbjct: 543 CEPDHFTRISLQLP 556