Pairwise Alignments

Query, 558 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 565 a.a., Sensor histidine kinase BtsS from Azospirillum sp. SherDot2

 Score =  665 bits (1716), Expect = 0.0
 Identities = 331/556 (59%), Positives = 439/556 (78%), Gaps = 2/556 (0%)

Query: 3   LILSLLQQMCVYLVLAYMLSKTPIFIPLLNISGRFDHKISVYVLFSLFCIMGTYFGLQIN 62
           L+LSLLQQMCVYLV+AY+LS+TP+F+PL +++ R+ HK++ YV+FS+FCIMGTYFGL I+
Sbjct: 8   LVLSLLQQMCVYLVIAYLLSRTPLFLPLTHVTVRWPHKLACYVIFSIFCIMGTYFGLHID 67

Query: 63  DAIANTRAIGAVMGGLFGGPVIGFAVGLTGGLHRYTLGGFTDLACAISTTAEGLIGGLLH 122
           D+IANTRAIGAV+GG+FGGP +G AVGLTGGLHRY+LGG + LACAIST AEGLIGGL+H
Sbjct: 68  DSIANTRAIGAVLGGIFGGPSVGLAVGLTGGLHRYSLGGMSALACAISTMAEGLIGGLVH 127

Query: 123 TYLLRKGKGKLLFSPSIVFAVTLFAEIVQMLIILVVAKPFEQSYALVSTIAAPMIIANSV 182
            +++R+G+ + LF+P  V AVT  AE+VQMLIIL VA+PFE +  LV  +AAPMI+AN++
Sbjct: 128 RHMVRQGRIEPLFNPLRVGAVTFVAEVVQMLIILAVARPFEAAMHLVEVVAAPMIVANTL 187

Query: 183 GAALFMSILLDRKTIFEEYSATFSRRALNIAERSVGILAAGFNPENANKIARIVYEQTNV 242
           GAALFM ILL+R+ + E+ S+ FS +AL IA R  G+L  GFN EN+ ++ARI++E+T V
Sbjct: 188 GAALFMRILLERRVLDEKQSSAFSAKALKIAARCDGVLRGGFNSENSTRVARIIFEETGV 247

Query: 243 GAVSITDREKILAFVGIGDDHHKPNTPISSQSTLDAINRNAIIYLDGKEHPYQCSLSPTC 302
           GAV+ITDREK+LAF+G+GDDHH P TPISS  T  AI  N +IY DG E  Y+CS+SP C
Sbjct: 248 GAVAITDREKLLAFIGMGDDHHLPGTPISSPQTHQAIASNQVIYADGNEVAYRCSISPAC 307

Query: 303 KLGSALIIPLRAGD-RVIGTIKLYEPKRKLFSTINMSMAQGIAQLLSSQILYGEYQQKQI 361
           +LG+AL+IPL   D  VIGTIKLYEPK K+FSTIN ++ +G+A+LLS+QIL G Y+Q++ 
Sbjct: 308 RLGAALVIPLVGEDGGVIGTIKLYEPKTKIFSTINRTLGEGVARLLSNQILAGRYEQQKA 367

Query: 362 LLSRAEIKLLQAQVNPHFLFNALNTISAVIRREPDKARELILHLSQFFRSNLKQNVETVT 421
           LL+++EIKLL AQVNPHFLFNALNTISAVIR +P++AR+L+ +LS FFR NLK+  +  T
Sbjct: 368 LLAQSEIKLLHAQVNPHFLFNALNTISAVIRNDPERARQLVQNLSTFFRKNLKRPSQMAT 427

Query: 422 LREELAHVNAYLTIEKARFSDRLDVEIAIDDALLERNVPSFTLQPLVENAIKHGTSNLLE 481
           L +E+ HV+AYL IE ARF+ RL VEI + D L    +P+F+LQPLVENAIKHGT+ LL 
Sbjct: 428 LADEVEHVSAYLQIELARFTGRLAVEIEVPDELRHARLPAFSLQPLVENAIKHGTAQLLS 487

Query: 482 AGKVRIYSEVVEGGMRVVVEDNAGLYQPPSEDYDGLGMQIVEKRLTNKFGLKSGLQIEVA 541
            G+VRI +    G + + VEDNAGL++      DGLGM IV++R+ N++G + G+ +   
Sbjct: 488 DGRVRIAARRDGGDLLLAVEDNAGLFE-AKPGGDGLGMTIVDRRIRNRYGEEYGVSVACE 546

Query: 542 PQEYTRMSFVIPQQGT 557
           P  +TR++  +P + T
Sbjct: 547 PDAFTRVTLRLPLEET 562