Pairwise Alignments

Query, 558 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 563 a.a., Sensor histidine kinase YehU from Alteromonas macleodii MIT1002

 Score =  758 bits (1956), Expect = 0.0
 Identities = 376/554 (67%), Positives = 460/554 (83%), Gaps = 1/554 (0%)

Query: 1   MDLILSLLQQMCVYLVLAYMLSKTPIFIPLLNISGRFDHKISVYVLFSLFCIMGTYFGLQ 60
           M+LILSLLQQMCVYLVLAYMLSKTP+F+P+L+IS    H+  VYV+FS FCI+GTYFGLQ
Sbjct: 1   MELILSLLQQMCVYLVLAYMLSKTPLFLPILSISSHRKHRYLVYVVFSSFCILGTYFGLQ 60

Query: 61  INDAIANTRAIGAVMGGLFGGPVIGFAVGLTGGLHRYTLGGFTDLACAISTTAEGLIGGL 120
           I+DAIANTRAIGAV+GGL GGPV+GFAVGLTGGLHRY+LGGFTD+ACAISTT EGLIGGL
Sbjct: 61  IDDAIANTRAIGAVIGGLLGGPVVGFAVGLTGGLHRYSLGGFTDVACAISTTLEGLIGGL 120

Query: 121 LHTYLLRKGKGKLLFSPSIVFAVTLFAEIVQMLIILVVAKPFEQSYALVSTIAAPMIIAN 180
           +H Y +R+ K   LF+P  V  +T  AE+ QM I+L VA+PFE+SYALVS IAAPM+IAN
Sbjct: 121 MHVYYVRQNKSLDLFNPWKVGVITFIAELFQMAILLTVAEPFEKSYALVSAIAAPMVIAN 180

Query: 181 SVGAALFMSILLDRKTIFEEYSATFSRRALNIAERSVGILAAGFNPENANKIARIVYEQT 240
           SVGAALF+SIL D+KTIFE+YSATFSRRAL+IA+RSVG+L +GF P NA K+ARI+YE+T
Sbjct: 181 SVGAALFISILSDKKTIFEKYSATFSRRALSIADRSVGVLTSGFTPVNAEKVARIIYEET 240

Query: 241 NVGAVSITDREKILAFVGIGDDHHKPNTPISSQSTLDAINRNAIIYLDGKEHPYQCSLSP 300
           NVGAV+ITD+EKILAF+G G DHH PNTPISS ST++++N N I++LDG E PYQC+L+ 
Sbjct: 241 NVGAVAITDKEKILAFIGTGADHHLPNTPISSSSTMESLNNNKIVHLDGAERPYQCTLNK 300

Query: 301 TCKLGSALIIPLRAGDRVIGTIKLYEPKRKLFSTINMSMAQGIAQLLSSQILYGEYQQKQ 360
           +C LGS LIIPL +G  V+GTIKLYEPKRK  ST+ +SMA+GIAQLLSSQI+YG YQQ++
Sbjct: 301 SCPLGSVLIIPLHSGSEVVGTIKLYEPKRKFMSTVTLSMAEGIAQLLSSQIVYGAYQQQK 360

Query: 361 ILLSRAEIKLLQAQVNPHFLFNALNTISAVIRREPDKARELILHLSQFFRSNLKQNVETV 420
            LLS++EIKLL AQVNPHFLFNALNTISA+IRR+P +AREL+L LS+FFR NLKQN   V
Sbjct: 361 DLLSQSEIKLLHAQVNPHFLFNALNTISAIIRRDPKRARELVLSLSRFFRINLKQNTAVV 420

Query: 421 TLREELAHVNAYLTIEKARFSDRLDVEIAIDDALLERNVPSFTLQPLVENAIKHGTSNLL 480
           TL+EE+ HVNAYL IEKARF++RL V I  DDA +   +PSFTLQPLVENA+KHG +  +
Sbjct: 421 TLKEEIDHVNAYLAIEKARFAERLQVTIKCDDAAMSALLPSFTLQPLVENAVKHGIAQRI 480

Query: 481 EAGKVRIYSE-VVEGGMRVVVEDNAGLYQPPSEDYDGLGMQIVEKRLTNKFGLKSGLQIE 539
           E G + +      +  + ++VEDNAGLY+P  E + GLGM IV+KRL ++FG ++GL IE
Sbjct: 481 EGGHLTLNVRCTTDNHIHILVEDNAGLYKPKKEQHAGLGMDIVDKRLIHQFGQQAGLVIE 540

Query: 540 VAPQEYTRMSFVIP 553
               ++TRMSF IP
Sbjct: 541 CRTNQFTRMSFSIP 554