Pairwise Alignments

Query, 237 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 261 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  105 bits (261), Expect = 1e-27
 Identities = 81/248 (32%), Positives = 131/248 (52%), Gaps = 28/248 (11%)

Query: 3   SALLIDDERFAREELAELLAESGQ-IEVIGQASNAIEGLKKINQLKPDVVFLDIQMPQIS 61
           +A+L DDE   R  L +LLAE    +E++  A N    L+ I Q +PDVVFLDI+MP++ 
Sbjct: 7   TAVLADDEPLLRHHLNKLLAELWPALEIVASAENGQIALQAIEQHQPDVVFLDIRMPKMD 66

Query: 62  GIELLS-MLDPETMPEVVFVTAYDQYALQAFEDNAFDYLLKPVDTERLAKTVQRLLRQHK 120
           GIE+   +L    +P VVF+TAYD+YA+ AFE +A DYLLKP+ + RLA   ++L +Q +
Sbjct: 67  GIEVARRLLQQPKVPLVVFITAYDEYAVSAFETHAIDYLLKPLSSSRLASCCEKLQQQLR 126

Query: 121 K------------SDYSPLTQPSLDQ----IPCTGLNRIVLLPINEVEFAYSDISGVNVQ 164
           +            S +  LT+    Q    +  +    I L+ +NE+ +  ++   +++ 
Sbjct: 127 RNVAPSNDLAQLMSQFEQLTRTVKPQYQVWLKASKGEEIHLIAVNELLYVKAEDKYLSLY 186

Query: 165 TAQQKATSQLTLK-VLEEKTALV------RCHRQYLVNLKAIREIKLLENGLAEMITHAG 217
                 T +  L+  L+E  A +      + HR  +VN+  I ++     G  +M  H  
Sbjct: 187 KVHGATTHEYLLRSSLKELLAQLDPNQFWQIHRSIVVNVGKIDKVTRDFGG--KMWVHID 244

Query: 218 H-KVPVSR 224
             ++PVSR
Sbjct: 245 RLQLPVSR 252