Pairwise Alignments

Query, 237 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 244 a.a., predicted response regulator in two-component system withYpdA (NCBI) from Escherichia coli BW25113

 Score =  116 bits (291), Expect = 4e-31
 Identities = 71/242 (29%), Positives = 126/242 (52%), Gaps = 9/242 (3%)

Query: 2   LSALLIDDERFAREELAELLAESGQIEVIGQASNAIEGLKKINQLKPDVVFLDIQMPQIS 61
           +  ++++DE  A++EL+ L+ E  Q+E++G   + ++ LK +   + D +FLDI +P + 
Sbjct: 1   MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60

Query: 62  GIELLSMLDP-ETMPEVVFVTAYDQYALQAFEDNAFDYLLKPVDTERLAKTVQRL----L 116
           G+ L   +      P +VF+TA+ ++A++AFE  AFDY+LKP    R+   +Q+L     
Sbjct: 61  GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120

Query: 117 RQHKKSDYSPLTQPSLDQIPCTGLNRIVLLPINEVEFAYSDISGVNVQTAQQKATSQLTL 176
           +Q   S  +       D I      RI++ PIN++ +A +      V T ++     + +
Sbjct: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180

Query: 177 KVLEEK---TALVRCHRQYLVNLKAIREIK-LLENGLAEMITHAGHKVPVSRRYLKELKE 232
                K   +   RCHR + VNL  IREI+    N     +     +VPVSR  +KE ++
Sbjct: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240

Query: 233 ML 234
           ++
Sbjct: 241 LM 242