Pairwise Alignments

Query, 237 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 242 a.a., two-component system response regulator BtsR from Erwinia tracheiphila SCR3

 Score =  216 bits (551), Expect = 2e-61
 Identities = 116/238 (48%), Positives = 164/238 (68%), Gaps = 3/238 (1%)

Query: 1   MLSALLIDDERFAREELAELLAESGQIEVIGQASNAIEGLKKINQLKPDVVFLDIQMPQI 60
           ML  +++DDE  AR  L  +L E   I ++ +  NAIE +  +++LKPDV+FLDIQMP+I
Sbjct: 1   MLRVVIVDDEPLARANLRLMLMEEPDITIVSECVNAIEAIGAVHRLKPDVLFLDIQMPRI 60

Query: 61  SGIELLSMLDPETMPEVVFVTAYDQYALQAFEDNAFDYLLKPVDTERLAKTVQRLLRQHK 120
           +G+E++SMLD    P +VF+TA+++YAL+AFE++AFDYLLKPV + RL KT+ R LRQ +
Sbjct: 61  NGLEMVSMLDDSHRPFIVFLTAFEEYALKAFEEHAFDYLLKPVASARLGKTLMR-LRQQR 119

Query: 121 KSDYSPLTQPS-LDQIPCTGLNRIVLLPINEVEFAYSDISGVNVQTAQQK-ATSQLTLKV 178
           +   +P   P  L  IPC+G +RI LL I++V F    +SGV V   Q K   ++LTL+ 
Sbjct: 120 QVLPAPQEHPQPLQFIPCSGHSRIYLLQIHDVAFVSCRMSGVYVTDNQGKEGLTELTLRT 179

Query: 179 LEEKTALVRCHRQYLVNLKAIREIKLLENGLAEMITHAGHKVPVSRRYLKELKEMLGF 236
           +E +T  +RCHRQYLVN+  ++EI L +NG AE+    G  VPVSRRYLK LK+  G+
Sbjct: 180 IENRTTFLRCHRQYLVNMAQLKEICLQDNGQAELKLRCGLTVPVSRRYLKPLKKAWGY 237