Pairwise Alignments

Query, 237 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., two component transcriptional regulator, LytTR family from Enterobacter asburiae PDN3

 Score =  116 bits (290), Expect = 5e-31
 Identities = 71/240 (29%), Positives = 127/240 (52%), Gaps = 8/240 (3%)

Query: 2   LSALLIDDERFAREELAELLAESGQIEVIGQASNAIEGLKKINQLKPDVVFLDIQMPQIS 61
           +  ++++DE  A++EL  L+    Q+E++G   + ++ LK +   + D +FLDI +P + 
Sbjct: 1   MKVIIVEDEFLAQQELTWLIKTHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60

Query: 62  GIELLSMLDP-ETMPEVVFVTAYDQYALQAFEDNAFDYLLKPVDTERLAKTVQRL--LRQ 118
           G+ L   ++     P +VFVTA+ ++A++AFE  AFDY+LKP    R+   +Q+L    Q
Sbjct: 61  GVLLAQNINQFAHKPFIVFVTAWKEHAVEAFELEAFDYILKPYQESRIVSMLQKLEAAWQ 120

Query: 119 HKKSDYSPLTQPSLDQIPCTGLNRIVLLPINEVEFAYSDISGVNVQTAQQKATSQLTLKV 178
            + +  SP  + + D I      RI++ P+N++ +A +      V T ++     + +  
Sbjct: 121 QQTAPASPTVREN-DTINLVKDERIIVTPVNDIYYAEAHEKMTFVYTRRESYVMAMNITE 179

Query: 179 LEEK---TALVRCHRQYLVNLKAIREIK-LLENGLAEMITHAGHKVPVSRRYLKELKEML 234
              K       RCHR + VNL  IREI+    N     +     +VPVSR  +KE ++++
Sbjct: 180 FCSKLPAAHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFQVPVSRSKVKEFRQLM 239