Pairwise Alignments

Query, 237 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 245 a.a., Transcriptional regulatory protein YpdB from Acinetobacter radioresistens SK82

 Score =  114 bits (285), Expect = 2e-30
 Identities = 74/244 (30%), Positives = 131/244 (53%), Gaps = 13/244 (5%)

Query: 2   LSALLIDDERFAREELAELLAESGQIEVIGQASNAIEGLKKINQLKPDVVFLDIQMPQIS 61
           +  L+ DDE  A E L+ L+ + G   V+   S+    ++ + Q +PDVV LDIQMP++ 
Sbjct: 1   MDILICDDEPLAVERLSRLVTQLGH-HVVATTSSGQHTIELVQQYQPDVVLLDIQMPEMD 59

Query: 62  GIELLSMLDP-ETMPEVVFVTAYDQYALQAFEDNAFDYLLKPVDTERLAKTVQRLLRQHK 120
           G++    L+  + MP +VF TAY+ +AL+AF+ +A  YLLKP++   L + + RL R + 
Sbjct: 60  GLQCAEQLNQLDLMPAIVFCTAYEDHALEAFKSSAEGYLLKPIEVSELQQVLDRLTRLN- 118

Query: 121 KSDYSPLTQPSLD-------QIPCTGLNRIVLLPINEVEFAYSDISGVNVQTAQQKATSQ 173
           ++  S L Q  +D       QI       + L+P+  + +  +D   V V+         
Sbjct: 119 QAQMSGLKQKDIDTAKLQRQQITAKSYRGVELVPVENIYYFLADQKYVTVRHKHGSILID 178

Query: 174 LTLKVLEEKTA--LVRCHRQYLVNLKAIREIKLLENGLAEM-ITHAGHKVPVSRRYLKEL 230
            TLK LE++ +   +R HR  LV++  +  ++++ +G  ++       ++ VSRR+L  L
Sbjct: 179 ETLKELEQEFSEKFIRIHRNALVSVDYLDGLEVVTSGQYQVRCRELDERLAVSRRHLPGL 238

Query: 231 KEML 234
           +E +
Sbjct: 239 RERI 242