Pairwise Alignments

Query, 330 a.a., beta-hexosaminidase from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., beta-hexosaminidase from Pseudomonas simiae WCS417

 Score =  266 bits (679), Expect = 7e-76
 Identities = 156/322 (48%), Positives = 201/322 (62%), Gaps = 9/322 (2%)

Query: 2   GPLWLDVAGYELSAEDREILQHPTVGGVILFGRNYHDNQQLLALNKAIRQAAKRPILIGV 61
           G L +DVAG  L+AEDR +L+ P VGG+I+F RN    +Q+ AL+ AIR A +  +L+ V
Sbjct: 7   GSLMVDVAGTWLTAEDRHLLRQPEVGGLIIFARNIEHPRQVRALSAAIR-AVRPDLLLAV 65

Query: 62  DQEGGRVQRFREGFSRIPPAQYYARAENGVELAEQGGWLMAAELIAHDVDLSFAPVLDMG 121
           DQEGGRVQR R+GF R+P  +  A   N   LAEQ GW+MA E++A  +DLSFAPVLD+ 
Sbjct: 66  DQEGGRVQRLRQGFVRLPAMRALADNPNAEYLAEQCGWIMATEVLAVGLDLSFAPVLDLD 125

Query: 122 FACKAI-GNRAFGEDVQTVLKHSSAFLRGMKAVGMATTGKHFPGHGAVIADSHLETPYDE 180
           +   A+ G R+F  D       + AF+RGM + GMA TGKHFPGHG   ADSH+  P DE
Sbjct: 126 YQRSAVVGTRSFEGDPVRAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDE 185

Query: 181 R---ETIAQDMAIFRAQIEAGVLDAMMPAHVVYPHYDAQPASGSSYWLKQVLREELGFKG 237
           R   +  A D+  F    +   L A+MPAHV+YP  DAQPA  S  WL+ +LR EL F G
Sbjct: 186 RSLEQIRAHDLVPFARLSKQ--LAAVMPAHVIYPQVDAQPAGFSRRWLQDILRGELQFDG 243

Query: 238 IVFSDDLSMEGAAVMGGPVERSHQALVAGCDMILICNKREAAVEVLDNLPIMEV-PQAE- 295
           ++FSDDLSM GA V+G    R   AL AGCDM L+CN R AA   L     M+V P A  
Sbjct: 244 VIFSDDLSMAGAHVVGDAASRIEAALSAGCDMGLVCNDRAAAELALTAAQRMKVKPSARI 303

Query: 296 ALLKKQQFSYSELKRLERWQQA 317
           A ++ Q  + ++ K+  RW  A
Sbjct: 304 ARMRGQAIASTDYKQDPRWLAA 325