Pairwise Alignments

Query, 330 a.a., beta-hexosaminidase from Vibrio cholerae E7946 ATCC 55056

Subject, 360 a.a., beta-N-acetylglucosaminidase (EC 3.2.1.52) from Variovorax sp. SCN45

 Score =  221 bits (563), Expect = 2e-62
 Identities = 144/330 (43%), Positives = 191/330 (57%), Gaps = 16/330 (4%)

Query: 3   PLWLDVAGYELSAEDREILQHPTVGGVILFGRNYHDNQQLLALNKAIRQAAKRPILIGVD 62
           PL +DVA  EL+A DR  L +P VGGVI F RN+ D  Q+ ALN  I+ A +  +LI VD
Sbjct: 12  PLIIDVAATELNAADRRRLANPLVGGVIHFARNWRDRAQMTALNAEIK-AIRPDLLICVD 70

Query: 63  QEGGRVQRFR-EGFSRIPPAQ-----YYARAENGVELAEQGGWLMAAELIAHDVDLSFAP 116
            EGGRVQRFR +GF+R+P  +     +   A    + A   G ++AAEL A  VD SFAP
Sbjct: 71  HEGGRVQRFRTDGFTRLPSMRALGELWMRDAMRATQAATAAGQVLAAELRACGVDFSFAP 130

Query: 117 VLDMGFACKA-IGNRAFGEDVQTVLKHSSAFLRGMKAVGMATTGKHFPGHGAVIADSHLE 175
           VLD+       IG+R+F  D + V   + + + GM   GM   GKHFPGHG V ADSH+E
Sbjct: 131 VLDLDHGGSGVIGDRSFHRDPRVVALLAKSVMHGMLQKGMRNCGKHFPGHGFVTADSHVE 190

Query: 176 TPYDER--ETIAQDMAIFRAQIEAGVLDAMMPAHVVYPHYDAQPASGSSYWLKQVLREEL 233
            P D+R  + I  D A     + AG L A+MPAHV+YP  D +PA  SS WLK VLR+  
Sbjct: 191 IPVDKRSLKDILNDDARPYDWL-AGTLTAVMPAHVIYPKVDKRPAGFSSKWLKAVLRQRF 249

Query: 234 GFKGIVFSDDLSMEGAAVMGGPV----ERSHQALVAGCDMILICNKREAAVEVLDNLPIM 289
            F G VFSDDLSME    + G +    + +  AL AGCD+ L+CN+     ++LD   + 
Sbjct: 250 AFDGAVFSDDLSMEAGRYIDGELLSYTDAALAALAAGCDLALLCNQSIGDGQLLDQF-LE 308

Query: 290 EVPQAEALLKKQQFSYSELKRLERWQQASA 319
            +  A    + Q  + SE++RL    Q +A
Sbjct: 309 GLDAASRNGQWQPDAASEVRRLALLPQEAA 338