Pairwise Alignments

Query, 330 a.a., beta-hexosaminidase from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., beta-hexosaminidase (NCBI) from Escherichia coli BW25113

 Score =  368 bits (944), Expect = e-106
 Identities = 189/336 (56%), Positives = 235/336 (69%), Gaps = 6/336 (1%)

Query: 1   MGPLWLDVAGYELSAEDREILQHPTVGGVILFGRNYHDNQQLLALNKAIRQAAKRPILIG 60
           MGP+ LDV GYEL AE+REIL HP VGG+ILF RNYHD  QL  L + IR A++  +++ 
Sbjct: 1   MGPVMLDVEGYELDAEEREILAHPLVGGLILFTRNYHDPAQLRELVRQIRAASRNRLVVA 60

Query: 61  VDQEGGRVQRFREGFSRIPPAQYYARA---ENGVELAEQGGWLMAAELIAHDVDLSFAPV 117
           VDQEGGRVQRFREGF+R+P AQ +A     E G +LA++ GWLMA+E+IA D+D+SFAPV
Sbjct: 61  VDQEGGRVQRFREGFTRLPAAQSFAALSGMEEGGKLAQEAGWLMASEMIAMDIDISFAPV 120

Query: 118 LDMGFACKAIGNRAFGEDVQTVLKHSSAFLRGMKAVGMATTGKHFPGHGAVIADSHLETP 177
           LD+G    AIG R++  D Q  L  +S F+ GM   GM TTGKHFPGHGAV ADSH ETP
Sbjct: 121 LDVGHISAAIGERSYHADPQKALAIASRFIDGMHEAGMKTTGKHFPGHGAVTADSHKETP 180

Query: 178 YDER---ETIAQDMAIFRAQIEAGVLDAMMPAHVVYPHYDAQPASGSSYWLKQVLREELG 234
            D R   E  A+DM++F + I    LDA+MPAHV+Y   D +PASGS YWLK VLR+ELG
Sbjct: 181 CDPRPQAEIRAKDMSVFSSLIRENKLDAIMPAHVIYSDVDPRPASGSPYWLKTVLRQELG 240

Query: 235 FKGIVFSDDLSMEGAAVMGGPVERSHQALVAGCDMILICNKREAAVEVLDNLPIMEVPQA 294
           F G++FSDDLSMEGAA+MG   ER   +L AGCDMIL+CN R+ AV VLDNL  ++  + 
Sbjct: 241 FDGVIFSDDLSMEGAAIMGSYAERGQASLDAGCDMILVCNNRKGAVSVLDNLSPIKAERV 300

Query: 295 EALLKKQQFSYSELKRLERWQQASANMQRLIEQFSE 330
             L  K  FS  EL    RW+  S  + +L E++ E
Sbjct: 301 TRLYHKGSFSRQELMDSARWKAISTRLNQLHERWQE 336