Pairwise Alignments

Query, 330 a.a., beta-hexosaminidase from Vibrio cholerae E7946 ATCC 55056

Subject, 597 a.a., glycoside hydrolase family 3 protein from Dickeya dianthicola ME23

 Score =  115 bits (289), Expect = 2e-30
 Identities = 90/272 (33%), Positives = 127/272 (46%), Gaps = 25/272 (9%)

Query: 26  VGGVILFGRNYHDNQQLLALNK---AIRQAAKRPILIGVDQEGGRVQRFREG-FSRIPPA 81
           VGGVILF  N  D QQ+  L     A++  A   + IG D EGG V R   G ++  P  
Sbjct: 53  VGGVILFANNLKDQQQIKTLTAWYAAMKTRADIRLFIGTDNEGGNVFRLPRGDYASFPGN 112

Query: 82  QYYARAENGV---ELAEQGGWLMAAELIAHDVDLSFAPVLDMGFAC--KAIGNRAFGEDV 136
              + A  G    +LA + G LMA ++++  ++ +FAPV+D+        I  RAF +D 
Sbjct: 113 MALSAAIGGGADDQLAVEQGKLMAQDMLSLHINTNFAPVVDVNTNPFNPVINVRAFSDDE 172

Query: 137 QTVLKHSSAFLRGMKAVGMATTGKHFPGHGAVIADSHLETPYDER---ETIAQDMAIFRA 193
            TV   +     GM+  G+ TT KHFPGHG+   DSH   P  +R   +  A D+A ++ 
Sbjct: 173 NTVSLLAEKVTAGMRQQGLITTYKHFPGHGSTSTDSHTGLPRVDRSWEDAFAIDIAPYKH 232

Query: 194 QIE-AGVLDAMMPAHVVYPHYD------------AQPASGSSYWLKQVLREELGFKGIVF 240
            I+     D +M AH+ YP  D              PA+ S      +LR ELG+ G+  
Sbjct: 233 AIDNQAAPDMVMTAHIQYPALDNSQIITRNGEKMTVPATMSREIQTNILRGELGYAGVTI 292

Query: 241 SDDLSMEGAAVMGGPVERSHQALVAGCDMILI 272
           SD L M   A              AG D+ L+
Sbjct: 293 SDALDMGAIADHFSQEGAVENVFAAGVDIALM 324