Pairwise Alignments

Query, 330 a.a., beta-hexosaminidase from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., glycosyl hydrolase from Agrobacterium fabrum C58

 Score =  131 bits (330), Expect = 2e-35
 Identities = 104/303 (34%), Positives = 150/303 (49%), Gaps = 29/303 (9%)

Query: 6   LDVAGYELSAEDREILQHPTVGGVILFGRNYHDNQQLLALNKAIRQAAKRPIL-IGVDQE 64
           L  +G  L+A++  + +     G ILFGRN  + QQ+  L  A+R A  RP   + +DQE
Sbjct: 9   LGCSGLSLTADEIALYRDEQPWGFILFGRNIGEKQQITDLVAAMRDAVGRPDAPVLIDQE 68

Query: 65  GGRVQRFREGFSRIPPAQYYARAENGVELAEQ-------GGWLM----AAELIAHDVDLS 113
           GGRVQR +      P  Q Y  A    E+ E+         WLM    A +L    +++ 
Sbjct: 69  GGRVQRIKP-----PILQAYPNARILGEIYERDRSAGLRAAWLMSRLHAFDLTKFGINVD 123

Query: 114 FAPVLDMGF--ACKAIGNRAFGEDVQTVLKHSSAFLRGMKAVGMATTGKHFPGHGAVIAD 171
             PVLD+    A   IGNRA+G     V +   A   G+KA GM    KH PGHG  + D
Sbjct: 124 CLPVLDVPVEGASNVIGNRAYGYTPTMVAEMGQAAADGLKAGGMLPIMKHMPGHGRGMVD 183

Query: 172 SHLETPYDE---RETIAQDMAIFRAQIEAGVLDAMMPAHVVYPHYDAQ-PASGSSYWLKQ 227
           SH E P  +    E  A D   FRA     +    M AH+V+   D + PA+ S   + +
Sbjct: 184 SHHELPVVDVPLDELDAHDFVPFRALKHELM---AMSAHLVFNAVDRERPATTSKKVIDE 240

Query: 228 VLREELGFKGIVFSDDLSMEGAAVMGGPVERSHQALVAGCDMILICN-KREAAVEVLDNL 286
           ++R  +GF G++ SDD SM   A+ G   ER+   +  GCD++L CN      +EV+  +
Sbjct: 241 IIRGRIGFDGLLMSDDSSMN--ALKGTLGERAANIVAGGCDIVLHCNGVMGEMLEVVKEV 298

Query: 287 PIM 289
           P++
Sbjct: 299 PVL 301