Pairwise Alignments

Query, 370 a.a., anhydro-N-acetylmuramic acid kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 363 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  183 bits (464), Expect = 7e-51
 Identities = 127/374 (33%), Positives = 184/374 (49%), Gaps = 32/374 (8%)

Query: 11  MSGTSLDGVDTALVALQDDNIELLAHHD---YPIPADLK---QRLLNVCIG------QPT 58
           MSGTS+DG+D A+  L+ D   ++ H     +P    L+   Q+ L           +P 
Sbjct: 1   MSGTSMDGIDIAV--LRTDGESVVRHGPSGYFPYDPGLRGIWQKALTTAKAIRERRERPG 58

Query: 59  TLIAMGELEHDLGHLFSDAVLALLQHSGYRAEHIRAIGCHGQTVFHQPTGTKPFTMQIGD 118
            L   GE E  L    + AV + L    +    I  IG HGQTV H+P   +  T+QIGD
Sbjct: 59  DL---GEAERKLTLAHAAAVKSFLHRHRFDVGDIDVIGFHGQTVLHRPD--EALTVQIGD 113

Query: 119 ANIIATRTGITTVADFRRKDVALGGQGAPLVPAFHRTIF----HAEQSTVVVLNIGGIAN 174
             ++A  TGI  V D R  D+  GGQGAPL+PA+H  +        ++  V +NIGGI+N
Sbjct: 114 GALLAEETGIDVVYDMRANDMVHGGQGAPLIPAYHMALSANLPDGFETPAVFVNIGGISN 173

Query: 175 ISVLKPNGEVVGYDTGPGNMLMDSWCQKERNQPYDKDALWAKQGSVNAALLSHLKQDHYF 234
           ++ +   G +  +D+GPGNML+D W +    + +DK    A  GSV A+L++   +  +F
Sbjct: 174 LTYIGEGGRLAAFDSGPGNMLIDQWIEAHTGKAFDKGGRTAAGGSVVASLVARYMESPFF 233

Query: 235 ALPAPKSTGRELFNLPWLETQLATFSVDATDVQRTLCEFTAQTIVEQVAPFAEGPQPQLL 294
           +    +S  R  F  P          V   D  RTL   T   I++  +   E  +   +
Sbjct: 234 SANIRRSLDRSDFVPP------QKGEVSLADGARTLSHLTGAAILKSASYLPEAAK-TYV 286

Query: 295 VCGGGAQNPLLMERLQALLPSW--QVAPTTQMGVDGDNMEAMAFAWLAQRRIHGLPSNLP 352
           VCGGG  NP++ME L  L      +V    + G DG  MEA A+A+LA R + GLP   P
Sbjct: 287 VCGGGRLNPVIMEELAGLAAKQGARVIAAEEAGFDGGAMEAEAWAYLAVRSLRGLPLTYP 346

Query: 353 AVTGASRLASLGVI 366
             TG     + GV+
Sbjct: 347 GTTGVKEPVTGGVL 360