Pairwise Alignments

Query, 494 a.a., carbon starvation protein A from Vibrio cholerae E7946 ATCC 55056

Subject, 683 a.a., Carbon starvation protein A paralog from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  101 bits (251), Expect = 1e-25
 Identities = 95/355 (26%), Positives = 148/355 (41%), Gaps = 80/355 (22%)

Query: 2   LWFLTC-VAALVGGYFIYGAFV-EKVFGINEKRQTPAHTKTDGVDYVPMSTPKVYLVQLL 59
           LW +   V+  +  Y  Y  ++ +KV  ++  R TPA    DG++YVP +   ++     
Sbjct: 4   LWIVVASVSVYLVAYRYYSLYIAQKVMKLDPTRATPAVINNDGLNYVPTNRYVLFGHHFA 63

Query: 60  NIAGVGPIFGPIMGALYG-PAAMLWIVVGCIFAGAVHDYFSGMLSIRNGGASVPSITGRY 118
            IAG GP+ GP++ A  G     LW++ G + AGAV D+    +S R  GAS+  +    
Sbjct: 64  AIAGAGPLVGPVLAAQMGYLPGTLWLLAGVVLAGAVQDFMVLFISSRRNGASLGEMIKEE 123

Query: 119 LGN--------GAKHFMNIFAIVLLLLVGVVFVSAPAGMITNLINQQTDFTVSMTTMVVI 170
           +G         G    M I   VL L+V      +P G+          FTV  T  + +
Sbjct: 124 MGTVPGTIALFGCFLIMIIILAVLALIVVKALAESPWGV----------FTVCSTVPIAL 173

Query: 171 IFAYYIL---------ATIVPVDKIIGRFY--------PLFGALLIFMSVGLMTAI---A 210
               Y+           +++ +  ++   Y        P +G  L F    +  A+   A
Sbjct: 174 FMGIYMRFLRPGRVGEVSVIGIVLLVASIYFGGVIAHDPYWGPALTFKDTTITFALIGYA 233

Query: 211 FSS-------------------EHQVLGGFEISDMVKNLNP------------NDMPLW- 238
           F S                   +  V+ G  +  ++  LNP               PLW 
Sbjct: 234 FVSALLPVWLILAPRDYLATFLKIGVIVGLALGIVI--LNPELKMPALTQYVDGTGPLWK 291

Query: 239 ----PALFITIACGAISGFHA-TQSPLMARCMENEKNGRFVFYGAMIGEGIIALI 288
               P LFITIACGA+SGFHA   S    + +  E + RF+ YGAM+ E  +A++
Sbjct: 292 GALFPFLFITIACGAVSGFHALISSGTTPKLLACETDARFIGYGAMLMESFVAVM 346



 Score = 32.7 bits (73), Expect = 4e-05
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 3/52 (5%)

Query: 391 IWRYFGFANQATAVMMLWTATAYL--MRHNKLHWICTVPALFMTTVCISFIL 440
           +W  FG +NQ  A + L  +T  L  M+  K  W+  +PA+++  +C ++ L
Sbjct: 532 LWPLFGISNQMLAAVALVLSTVVLIKMQRTKYIWVTVIPAVWL-LICTTWAL 582