Pairwise Alignments

Query, 494 a.a., carbon starvation protein A from Vibrio cholerae E7946 ATCC 55056

Subject, 701 a.a., pyruvate/proton symporter CstA from Escherichia coli ECRC62

 Score =  113 bits (283), Expect = 2e-29
 Identities = 128/559 (22%), Positives = 215/559 (38%), Gaps = 133/559 (23%)

Query: 2   LWFLTC-VAALVGGYFIYGAFVEK-VFGINEKRQTPAHTKTDGVDYVPMSTPKVYLVQLL 59
           LW +   V   +  Y  YG ++ K V  ++  R TPA    DG+DYVP     ++     
Sbjct: 35  LWIVVASVCIYLIAYRFYGLYIAKNVLAVDPTRMTPAVRHNDGLDYVPTDKKVLFGHHFA 94

Query: 60  NIAGVGPIFGPIMGALYG-PAAMLWIVVGCIFAGAVHDYFSGMLSIRNGGASVPSITGRY 118
            IAG GP+ GP++ A  G    M+W++ G + AGAV D+    +S R  G S+  +    
Sbjct: 95  AIAGAGPLVGPVLAAQMGYLPGMIWLLAGVVLAGAVQDFMVLFVSTRRDGRSLGELVKEE 154

Query: 119 LGNGAKHFMNIFAIVLLLLVGVVFVSAPAGMITNLINQQT--DFTVSMTTMVVI---IFA 173
           +G  A     + A+V   ++ V+ ++  A ++   +       +TV+ T  + +   I+ 
Sbjct: 155 MGPTA----GVIALVACFMIMVIILAVLAMIVVKALTHSPWGTYTVAFTIPLALFMGIYL 210

Query: 174 YYILATIVPVDKIIGRFYPLF---------------------GALLIFMSVG-------- 204
            Y+    +    +IG  + +F                     G  L +M VG        
Sbjct: 211 RYLRPGRIGEVSVIGLVFLIFAIISGGWVAESPTWAPYFDFTGVQLTWMLVGYGFVAAVL 270

Query: 205 ----LMTAIAFSSEHQVLG---GFEISDMV----------KNLNPNDMPLW-----PALF 242
               L+    + S    +G   G  +  ++                  P+W     P LF
Sbjct: 271 PVWLLLAPRDYLSTFLKIGTIVGLAVGILIMRPTLTMPALTKFVDGTGPVWTGNLFPFLF 330

Query: 243 ITIACGAISGFHA-TQSPLMARCMENEKNGRFVFYGAMIGEGIIALIWCTVA-------- 293
           ITIACGA+SGFHA   S    + + NE    F+ YG M+ E  +A++    A        
Sbjct: 331 ITIACGAVSGFHALISSGTTPKMLANEGQACFIGYGGMLMESFVAIMALVSACIIDPGVY 390

Query: 294 ---------LSFFGSLEALSEAV-----------------------------KNGGPGNV 315
                    L+  G+ + ++ A                              + GG   +
Sbjct: 391 FAMNSPMAVLAPAGTADVVASAAQVVSSWGFSITPDTLNQIASEVGEQSIISRAGGAPTL 450

Query: 316 VYGASFGLLGVFGGVI--------AFLGVVILPITSGDTAFRSSRLILAEYFNMEQKTLR 367
             G ++ L G  GG++        A L   +  +T+ D   R++R +L +   +    L+
Sbjct: 451 AVGMAYILHGALGGMMDVAFWYHFAILFEALFILTAVDAGTRAARFMLQDLLGVVSPGLK 510

Query: 368 -------NRLLMAVPLFVIGAVLTQ--VD----FGIIWRYFGFANQATA--VMMLWTATA 412
                  N L  A+ +   G  L Q  VD       +W  FG ANQ  A   +ML     
Sbjct: 511 RTDSLPANLLATALCVLAWGYFLHQGVVDPLGGINTLWPLFGIANQMLAGMALMLCAVVL 570

Query: 413 YLMRHNKLHWICTVPALFM 431
           + M+  +  W+  VP  ++
Sbjct: 571 FKMKRQRYAWVALVPTAWL 589