Pairwise Alignments

Query, 494 a.a., carbon starvation protein A from Vibrio cholerae E7946 ATCC 55056

Subject, 701 a.a., Peptide transporter CstA from Acinetobacter radioresistens SK82

 Score =  119 bits (297), Expect = 5e-31
 Identities = 138/552 (25%), Positives = 220/552 (39%), Gaps = 124/552 (22%)

Query: 2   LWFLTCVAALVG-GYFIYGAFV-EKVFGINEKRQTPAHTKTDGVDYVPMSTPKVYLVQLL 59
           +W +   A +    Y  Y  F+  KVF +N +R TPA+  TDG+DYVP +   ++     
Sbjct: 41  VWLVLAAACVYSIAYRFYSLFIANKVFELNARRLTPAYRMTDGLDYVPTNKYVLFGHHFA 100

Query: 60  NIAGVGPIFGPIMGALYG-PAAMLWIVVGCIFAGAVHDYFSGMLSIRNGGASVPSITGRY 118
            IAG GP+ GPI+ A  G     +W++ G + AGAV D+    +S R  G S+  +  + 
Sbjct: 101 AIAGAGPLVGPILAAQMGYLPGTIWLLAGVVLAGAVQDFLVLFISTRRDGRSLGEMAKQE 160

Query: 119 LGN--------GAKHFMNIFAIVLLLLVGVVFVSAPAGMIT---------------NLIN 155
           LG+        GA   M I   VL L+V     ++P G+ +                 I 
Sbjct: 161 LGSFAGVIVMLGALGVMIIILAVLALVVVKALTNSPWGVFSIAATIPIAIFMGIYMRYIR 220

Query: 156 QQTDFTVSMTTMVVIIFA------------------------------YYILATIVPVDK 185
                 VS+   ++++ A                              Y  +A+++PV  
Sbjct: 221 PGKIAEVSVIGFILMMLAIVYGGNIAAHPYWGPFFTLSGTQLTWCLIIYGFVASVLPVWL 280

Query: 186 IIGRFYPLFGALLIFMSVGLMTAIAFSSEHQVLGGFEISDMVKNLNPNDM-PLWPALFIT 244
           ++     L   L I + VGL   I F+     +    ++  +    P     L+P LFIT
Sbjct: 281 LLAPRDYLSTFLKIGVIVGLAVGIIFALPELKMPA--VTHFIDGTGPVFAGSLFPFLFIT 338

Query: 245 IACGAISGFHA-TQSPLMARCMENEKNGRFVFYGAMIGE---GIIALIWCTV-------- 292
           IACGAISGFHA   S    + +ENE + R + YG M+ E    I+A+I  TV        
Sbjct: 339 IACGAISGFHALVSSGTTPKLVENEVHIRMIGYGGMLMESFVAIMAMICATVLEPGVYFA 398

Query: 293 ----ALSFFGSLEALSEAVKN--------------------------GGPGNVVYGASFG 322
               A     ++E+ +EAV+N                          GG      G +  
Sbjct: 399 INAPAAVLGTTVESAAEAVRNLGFVVTPEALALLAKEVGETTILSRTGGAPTFAIGMAHI 458

Query: 323 LLGVFGG--------VIAFLGVVILPITSGDTAFRSSRLILAEYFNMEQKTLR------- 367
           +  +F            A L   +  +T+ D   R+ R ++ +   +    ++       
Sbjct: 459 ISEIFNSRAMMSFWYHFAILFEALFILTAVDAGTRACRFMVQDTVGIVIPAVKQSHNFFG 518

Query: 368 NRLLMAVPL-----FVIGAVLTQV-DFGIIWRYFGFANQATAVM--MLWTATAYLMRHNK 419
           N L  AV +     FV   V+  +     +W  FG  NQ  A M  +L T   + M+  K
Sbjct: 519 NLLGTAVAVAGWGFFVYQGVVDPLGGINSLWPLFGIGNQILAAMALILGTVILFKMKKEK 578

Query: 420 LHWICTVPALFM 431
             W+  +P +F+
Sbjct: 579 YVWVTILPTIFL 590