Pairwise Alignments

Query, 316 a.a., 4-hydroxy-3-methylbut-2-enyl diphosphate reductase from Vibrio cholerae E7946 ATCC 55056

Subject, 234 a.a., 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.7.4) from Variovorax sp. SCN45

 Score =  278 bits (711), Expect = 9e-80
 Identities = 145/236 (61%), Positives = 175/236 (74%), Gaps = 4/236 (1%)

Query: 59  ELNEVPDDNIVIFSAHGVSQAVRQEAKERSLTVFDATCPLVTKVHMEVARASRKHMEVVL 118
           EL+EVPD   VIFSAHGVS+AVR EA+ R L VFDATCPLVTKVH+EV+R  R   +VVL
Sbjct: 1   ELDEVPDGATVIFSAHGVSKAVRAEAERRGLKVFDATCPLVTKVHLEVSRHCRAGRDVVL 60

Query: 119 IGHAGHPEVEGTMGQYASDTGG--MYLVEKPEDVVSLQAKVKDPSNLHYVSQTTLSVDET 176
           IGH GHPEVEGTMGQ+  + G   +YLVE  +DV +L   V  P NL Y +QTTLSVD+T
Sbjct: 61  IGHEGHPEVEGTMGQWKREAGSGRIYLVEDADDVAALH--VDQPQNLAYTTQTTLSVDDT 118

Query: 177 ADVIDELRRVFPKIQGPRKDDICYATQNRQDAVRILAEQVDVMVVVGSKNSSNSTRLKEL 236
             VI+ LR  FP +QGP+ DDICYATQNRQD+VR LA + D+++VVGS NSSNS RL+EL
Sbjct: 119 RSVIEALRAKFPAVQGPKNDDICYATQNRQDSVRELAARCDLVLVVGSPNSSNSNRLREL 178

Query: 237 AEKLGTPGYLIDCPQDIDPEWFVDAQLIGVTAGASAPEELVNQILDRIKELGATSV 292
           AE+ G   YLID   +IDP W      IG+TAGASAPE LV  +++R++ELGA  V
Sbjct: 179 AEREGVAAYLIDGAVEIDPRWVEGRSRIGITAGASAPEVLVRGVIERLRELGAQHV 234