Pairwise Alignments

Query, 949 a.a., isoleucine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 961 a.a., Isoleucyl-tRNA synthetase (EC 6.1.1.5) from Sphingobium sp. HT1-2

 Score =  670 bits (1729), Expect = 0.0
 Identities = 399/995 (40%), Positives = 565/995 (56%), Gaps = 107/995 (10%)

Query: 3   EYKDTLNLPETGFPMRGDLAKREPEMLQRWYQEDLYGAIRQAKKGKKSFVLHDGPPYANG 62
           +YK T+ LP T FPM+  LA++EP +  RW   DLYG +R+ + G++ F+LHDGPPYANG
Sbjct: 6   DYKSTVFLPVTDFPMKAGLAQKEPAIAARWAAMDLYGKLREKRAGRERFILHDGPPYANG 65

Query: 63  DIHIGHALNKILKDVIIKSKTLSGFDAPYIPGWDCHGLPIELMVEKKVGKPGQ---KVTA 119
           DIH+GHA+NK+LKD+I++S++L G DAPY+PGWDCHGLPIE  +E++  K      +V A
Sbjct: 66  DIHMGHAMNKVLKDIIVRSQSLLGKDAPYVPGWDCHGLPIEWKIEEEYRKKKMNKDEVPA 125

Query: 120 AEFREKCREYAAGQVEGQKESFKRLGILGEWDKPYRTMDFVTEANIIRALGKIADNGHLL 179
           +EFR +CR YA   V+ QKE FKRLG++G+W  PY TM F  EA I+  L K A++G L 
Sbjct: 126 SEFRAQCRAYADKWVDVQKEQFKRLGVMGDWADPYLTMKFDAEATIVGELLKFAESGQLY 185

Query: 180 KGFKPVHWCTDCGSALAEAEVEYKNKVSPSIDVRFKAADEAAVLAKFGLAAGHEGKGDVS 239
           +G KPV W     +ALAEAEVEY++  S  IDV F+  +        G  A         
Sbjct: 186 RGAKPVMWSPVEKTALAEAEVEYEDITSTQIDVAFEIVEAPNAPELVGAHA--------- 236

Query: 240 IVIWTTTPWTLPANRAVCLRADLEYVLIQV---EGEQPERIIVASELAKSVMDRA----- 291
            VIWTTTPWT+P N+A+    +++Y +      +G+   R ++A+EL  +   RA     
Sbjct: 237 -VIWTTTPWTIPVNQALAYGPEVDYAITSCKDHDGKLLGRFLIATELVAAFQARADAAVR 295

Query: 292 GIEHFHNLG------FATGADLELVQFQHP------FYSFTVPAILGDHVTTDSGTGVVH 339
           G+E+   +G      F  G+DL     +HP      F++   P + GD VTTD+GTG+VH
Sbjct: 296 GVENPELVGAWAIEGFVNGSDLAGAVARHPMHALGGFFAKPRPFLAGDFVTTDAGTGLVH 355

Query: 340 TAPGHGQEDFAVGQQYGLEVANPVGSNGVYLPDTELFAGQHV-----FKANDS-VLEVLK 393
            AP HG++DFA+ +  GL     V  +G Y  D     GQ       F   D  +   L+
Sbjct: 356 MAPDHGEDDFALCKANGLNPVFAVEGDGKYRADWLWLGGQGSVINPKFVGKDGPICSDLR 415

Query: 394 EKGALLH-HHAYEHSYPHCWRHKTPIIFRATPQWFVSME--QAG---------------- 434
           E GALL     ++HSYPH WR K  IIFR TPQWF+ M+  Q G                
Sbjct: 416 EAGALLAASDDFKHSYPHSWRSKAKIIFRCTPQWFIPMDKPQEGVVADVDGGVMPTPIVT 475

Query: 435 -----LREQALTAIKGVHWMPDWGQSRIEGMVAGRPEWCISRQRTWGVPIALFVHKETAE 489
                LRE AL AI+   W+P+   +RI  MV GRP+W ISRQR WGVPIAL+VH++T +
Sbjct: 476 GNGPTLREIALDAIEHTRWVPERSTNRIRSMVEGRPDWVISRQRAWGVPIALYVHRKTGD 535

Query: 490 LHPNSADLIEKVAQLVEQKGIQAWWDLDTAELLGAE-DAANYEKVLDTLDVWFDSGVTHS 548
              + A +  ++ +  +  G  AW+  D   LLG + D A+YE V D LDVWFDSG THS
Sbjct: 536 YLVDKA-VNARIIEAFKGAGADAWFGADHQALLGPDYDLADYEVVNDILDVWFDSGSTHS 594

Query: 549 AVVDARQEFNGAEADMYLEGSDQHRGWFQSSLISSVAMKGKAPYKEVLTHGFVVDGQGRK 608
            VV+ R    G  AD+Y+EGSDQHRGWFQSSL+ S   +G+APYK VLTHGF +DG G+K
Sbjct: 595 FVVEGRYG-EGTRADLYIEGSDQHRGWFQSSLLESCGTRGQAPYKAVLTHGFALDGSGKK 653

Query: 609 MSKSIGNVVAPQDVTNKLGADILRLWVASTDYTGEVAVSDEILKRSADAYRRIRNTARFF 668
           MSKS+GNVV P  +  + GADILR+WVASTDY  +V +  E+L  S+DAYR++RNT R+ 
Sbjct: 654 MSKSLGNVVDPLKIMAESGADILRVWVASTDYFDDVRIGKEVLAGSSDAYRKLRNTFRYM 713

Query: 669 LANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQE----IIQAYQDYN---LHAVVQRL 721
           L  L+ ++ + + +   +M  L+R+ + R      E    + +A +  N        + +
Sbjct: 714 LGALSDYDES-EAVSYAEMPELERYMLHRLAQLDAELRAVVDKAAKSENWLEFSRYTRAI 772

Query: 722 MNFCSIEMGSFYLDVIKDRQYTAKRGGHAQRSCQTALFFIVEALVRWMAPIMSFTADEIW 781
            +F + ++ +F+ D+ KD  Y   +    +R+ +T L  +  ALVR++API+ FTA+E+W
Sbjct: 773 FDFANSDLSAFFFDIRKDCLYCDAKSDPKRRAYRTLLDTLFHALVRYVAPIIPFTAEEVW 832

Query: 782 NA-MPAQQADGSARDKFVFTTEWFDGLFGLAEGEELNNAFWNDIQKVRGSVNKLLENARN 840
            +  P+ +      +       W D          LN+  W +++  R  VN+ +E  R 
Sbjct: 833 QSRFPSDEDSVHFLEWPEVDHRWIDS--------HLNDK-WAELRDQREQVNEAIEPFRR 883

Query: 841 EKLIGGSLQAELVLFADDSLASKLAKLGDELRFVLLTSKAVVKPLAEKSEAAQATDIDGL 900
           EK+I  SL+A++ +             G+     +L S  V    AE +  A+     G 
Sbjct: 884 EKVIRSSLEADVTM-------------GE-----MLPSDGV--NFAEIAIVARIEMGVGD 923

Query: 901 FVQVNKTEAEKCDRCWHHTPDVGTIAGHTTICGRC 935
            + V  +E  KC RCW   P+V       T+C RC
Sbjct: 924 GIIVKPSEWHKCGRCWRLLPEV---EEDGTLCNRC 955