Pairwise Alignments

Query, 525 a.a., lipid II flippase MurJ from Vibrio cholerae E7946 ATCC 55056

Subject, 536 a.a., murein biosynthesis integral membrane protein MurJ from Rhodanobacter sp000427505 FW510-R12

 Score =  406 bits (1044), Expect = e-118
 Identities = 230/546 (42%), Positives = 331/546 (60%), Gaps = 41/546 (7%)

Query: 7   SKRLLKSGIIVSAMTLISRVLGLVRDVVVANLMGAGASADVFFFANRIPNFLRRLFAEGA 66
           S  +L+  +  S+MT++SRVLGLVRD+ +    GA  + D F+ A RIPNF+RRLFAEG+
Sbjct: 3   SPSMLRGLLSFSSMTMVSRVLGLVRDMSINAAFGANGATDAFWVAFRIPNFMRRLFAEGS 62

Query: 67  FSQAFVPVLTEYHASGDINKTRDLIARASGTLGVLVTIVTLIGVLGSGAVTALFGAGWFL 126
           FS AFVPV TE   +G   + ++L+AR SGTLG ++ ++T +G++ +  VT LF  G   
Sbjct: 63  FSTAFVPVFTEVKETGTHAQLKELMARVSGTLGGVLLLITALGIIFAPQVTVLFSPGAID 122

Query: 127 DWLNGGPAAGKFELASLLLKITFPYLWFITFVALSGAILNTLGKFAVSSFTPVFLNVMMI 186
           + +       KF L   LL++TFP+L F++  AL G  LN+  +FA+ + TPV LN+ MI
Sbjct: 123 EPV-------KFGLTVELLRLTFPFLLFVSLTALCGGALNSFHRFALPALTPVILNLCMI 175

Query: 187 LCAWYLSPNLEQPEVGLAIGVFLGGLVQFLFQLPFLIKAGVLVRPKWGWKDPGVVKIRTL 246
             A +LS  L+ P + +   +   G++Q LFQLP L    +L  P+WGW  P V KI  L
Sbjct: 176 AGALWLSKRLQTPILAMGWAILAAGILQLLFQLPALRGLDLLTLPRWGWSHPQVRKIMRL 235

Query: 247 MIPALFGVSVSQINLLFDSFVASFLQTGSISWLYYSDRLLEFPLGLFGIAIATVILPALS 306
           M+P LFG SV+QINLLFD+ +AS L  GS SWL  +DR LE PLG+FG+A+ TVILP+LS
Sbjct: 236 MVPTLFGSSVAQINLLFDTVIASLLVVGSQSWLSQADRFLELPLGVFGVALGTVILPSLS 295

Query: 307 RKHVDAHSDGFAHTMDWGIRMVTFLGIPAMLGLMVLAKPMLMVLFMRGEFTPSDVEQASY 366
           R HV   + GF+H +DWG+R+   + +PAM  LM+LA P++  LF  G ++  D   A+ 
Sbjct: 296 RHHVTTDTAGFSHALDWGLRVTLLIAVPAMFALMLLAGPLVATLFQHGHWSAHDTHMATL 355

Query: 367 SLLAYSSGLLSFMLIKVLAPGYYSRQDTKTPVRYGIIAMVSNIVLNAIF----------- 415
           S+ A S GL +F L+KVL P +Y+RQDT+TPVR  + ++++N++LN +F           
Sbjct: 356 SITALSFGLPAFALVKVLLPAFYARQDTRTPVRAAVASLLANMLLNVVFLALLFELWAPA 415

Query: 416 -----AWFYG-------YVGLAVATSMSAFLNMALLYRGLHLQGVYHLTRKTVW--FVAR 461
                 W  G       ++ L +A++++A++N+ LL+  L   GVY   R+  W   + R
Sbjct: 416 ELKRLPWMDGLARLPGLHMALGMASAVAAYVNLWLLWHWLKQAGVYQ--RQPGWPRHLLR 473

Query: 462 LAMAGAVMTGALLWQLDTMATWLSWGISQRALT----LTGLIGLGVASYLAILLLLGVRL 517
           LA A A M   LL  L     W +W      LT    L  L+  G A Y+A+L   G RL
Sbjct: 474 LAAACAAMVALLLAGL---WWWPNWTHGVPVLTRLWHLAALVLAGGAGYVAVLFAGGFRL 530

Query: 518 KDLKAA 523
           +DL+AA
Sbjct: 531 RDLRAA 536