Pairwise Alignments

Query, 525 a.a., lipid II flippase MurJ from Vibrio cholerae E7946 ATCC 55056

Subject, 555 a.a., Peptidoglycan lipid II flippase MurJ from Variovorax sp. SCN45

 Score =  306 bits (783), Expect = 2e-87
 Identities = 186/524 (35%), Positives = 281/524 (53%), Gaps = 29/524 (5%)

Query: 10  LLKSGIIVSAMTLISRVLGLVRDVVVANLMGAGASADVFFFANRIPNFLRRLFAEGAFSQ 69
           LLKS   VS +TL SR+ GLVRDV+ A++ G  A  D F  A RIPN  RR+F EGAFSQ
Sbjct: 41  LLKSASTVSLLTLASRITGLVRDVLFASVFGVSALTDAFNVAFRIPNLFRRVFGEGAFSQ 100

Query: 70  AFVPVLTEYHASGDINKTRDLIARASGTLGVLVTIVTLIGVLGSGAVTALFGAGWFLDWL 129
           AFVPVL            R LI   +  L   + +V +IGV+ +  +           W 
Sbjct: 101 AFVPVLAGRKTEAGEEGARQLIDHVATLLTWTLVVVCVIGVVAAPLMV----------WA 150

Query: 130 NGGPAAGKFELASLLLKITFPYLWFITFVALSGAILNTLGKFAVSSFTPVFLNVMMILCA 189
                AG F+ A ++ +  FPY+ F++ VAL+G ILNT  KFAV + +PV LN+ +IL  
Sbjct: 151 MASGLAG-FDSAVVMTRWMFPYIGFMSLVALAGGILNTWRKFAVPAASPVLLNIALILSI 209

Query: 190 WYLSPNLE----QPEVGLAIGVFLGGLVQFLFQLPFLIKAGVLVRP-------KWGWKDP 238
              +P       +P     +GV +GG++Q   Q+P L   G++ R        +  W DP
Sbjct: 210 SVGAPLFRRYGIEPIYAQCVGVLVGGMLQLALQIPALRSLGLMPRVGASFRALRAAWTDP 269

Query: 239 GVVKIRTLMIPALFGVSVSQINLLFDSFVASFLQTGSISWLYYSDRLLEFPLGLFGIAIA 298
              K+  LM+PAL GVSV+QI+LL ++ +AS L  GS++W+  +DRL+EFP  + G+A+ 
Sbjct: 270 TTRKVMKLMLPALLGVSVAQISLLINTQIASHLAAGSVTWVVNADRLMEFPTAMLGVALG 329

Query: 299 TVILPALSRKHVDAHSDGFAHTMDWGIRMVTFLGIPAMLGLMVLAKPMLMVLFMRGEFTP 358
            V++P L+          ++  +DWG+R+V  L  P  + L++ A+P++ VLF  G +  
Sbjct: 330 VVLMPQLAGARAAKDDARYSSLLDWGLRLVVLLSAPCAVALLLFAQPLVAVLFHNGAYAG 389

Query: 359 SDVEQASYSLLAYSSGLLSFMLIKVLAPGYYSRQDTKTPVRYGIIAMVSNIVLNAIFAWF 418
            DV + + +L  Y  GL+  + +KVLAPGYY++QDT+TP+   +  +V   VLN      
Sbjct: 390 DDVRRTALALTGYGVGLIGIVAVKVLAPGYYAKQDTRTPMLIAVGVLVFTQVLNFFLVPV 449

Query: 419 YGYVGLAVATSMSAFLNMALLYRGLHLQGVYHLTRKTVWFVARLAMAGAVMTGALLWQLD 478
             +  L +  ++ A +N   L  GL  +G Y        F  ++ +AG ++  ALL    
Sbjct: 450 LQHAALTLTIAIGALVNATWLLVGLIRRGSYKPEPGWGKFALQV-LAGTLVLAALLVWGS 508

Query: 479 TMATWLSWGISQRAL----TLTGLIGLGVASYLAILLLLGVRLK 518
               W+  G+ ++ L     L  LI   V  Y  +L  +GVRL+
Sbjct: 509 AHFDWI--GLREQRLLRIGLLAALIAASVVLYFGVLAAVGVRLR 550