Pairwise Alignments

Query, 525 a.a., lipid II flippase MurJ from Vibrio cholerae E7946 ATCC 55056

Subject, 517 a.a., murein biosynthesis integral membrane protein MurJ from Variovorax sp. OAS795

 Score =  306 bits (785), Expect = 9e-88
 Identities = 190/524 (36%), Positives = 285/524 (54%), Gaps = 29/524 (5%)

Query: 10  LLKSGIIVSAMTLISRVLGLVRDVVVANLMGAGASADVFFFANRIPNFLRRLFAEGAFSQ 69
           LLKS   VS +TL SR+ GLVRDV+ A++ G  A  D F  A RIPN  RR+F EGAFSQ
Sbjct: 3   LLKSASTVSLLTLASRITGLVRDVLFASVFGVSALTDAFNVAFRIPNLFRRVFGEGAFSQ 62

Query: 70  AFVPVLTEYHASGDINKTRDLIARASGTLGVLVTIVTLIGVLGSGAVTALFGAGWFLDWL 129
           AFVPVL            + LI   +  L   + ++ + GVLG         A W + W 
Sbjct: 63  AFVPVLAARKTEAGEEGAKALIDHVATLLTWALVVLCVAGVLG---------APWLV-WA 112

Query: 130 NGGPAAGKFELASLLLKITFPYLWFITFVALSGAILNTLGKFAVSSFTPVFLNVMMILCA 189
                AG F+ A ++ +  FPY+ F++ VAL+G +LNT  KFAV + +PV LN+ +IL  
Sbjct: 113 MASGLAG-FDAAVVMTRWMFPYIGFMSLVALAGGVLNTWRKFAVPAASPVLLNLSLILAI 171

Query: 190 WYLSPNLE----QPEVGLAIGVFLGGLVQFLFQLPFLIKAGVLVR--PKW-----GWKDP 238
              +P       +P      GV +GG++Q   Q+P L   G++ R    W      W DP
Sbjct: 172 VAGAPLFRRYGIEPIYAQCAGVLVGGVLQLALQVPALRALGLMPRIGASWKALRAAWADP 231

Query: 239 GVVKIRTLMIPALFGVSVSQINLLFDSFVASFLQTGSISWLYYSDRLLEFPLGLFGIAIA 298
              K+  LM+PAL GVSV+QI+LL ++ +AS L  GS++W+  +DRL+EFP  + G+A+ 
Sbjct: 232 TTRKVLKLMLPALLGVSVAQISLLINTQIASHLAVGSVTWVSNADRLMEFPTAMLGVALG 291

Query: 299 TVILPALSRKHVDAHSDGFAHTMDWGIRMVTFLGIPAMLGLMVLAKPMLMVLFMRGEFTP 358
            V++P L+          ++  +DWG+R+V  L  P  + L++ A+P++ VLF  G +  
Sbjct: 292 VVLMPQLAGARAAKDDARYSSLLDWGLRLVILLSAPCAVALLLFAQPLVAVLFHNGAYQG 351

Query: 359 SDVEQASYSLLAYSSGLLSFMLIKVLAPGYYSRQDTKTPVRYGIIAMVSNIVLNAIFAWF 418
            DV + + +L+ Y  GL+  + +KVLAPGYY+RQDT+TP+   I  +V   VLN      
Sbjct: 352 EDVRRTTVALMGYGVGLVGLVAVKVLAPGYYARQDTRTPMLIAIGVLVLTQVLNFFLVPL 411

Query: 419 YGYVGLAVATSMSAFLNMALLYRGLHLQGVYHLTRKTVWFVARLAMAGAVMTGALLWQLD 478
             +  L +  ++ A +N   L  GL  +G Y        FV ++ +AGA++  ALL    
Sbjct: 412 LQHAALTLTIAIGALVNAVWLLVGLIRRGSYRPEPGWGKFVLQV-LAGALVLAALLAWGS 470

Query: 479 TMATWLSWGISQRALTLTGLIGLGVAS----YLAILLLLGVRLK 518
               W+  G+ ++     GL+   +A     Y A+L  +GVRL+
Sbjct: 471 RHFDWI--GLREQRFHRIGLLAALIAGAALLYFAVLAAVGVRLR 512