Pairwise Alignments

Query, 525 a.a., lipid II flippase MurJ from Vibrio cholerae E7946 ATCC 55056

Subject, 524 a.a., Peptidoglycan lipid II flippase MurJ from Sphingobium sp. HT1-2

 Score =  300 bits (768), Expect = 9e-86
 Identities = 198/524 (37%), Positives = 294/524 (56%), Gaps = 19/524 (3%)

Query: 9   RLLKSGIIVSAMTLISRVLGLVRDVVVANLMGAGASADVFF-FANRIPNFLRRLFAEGAF 67
           +L+K+   V  +TL SRVL LVRD + A  +GAG ++D F   A R+PN  R LFAEGAF
Sbjct: 2   KLVKALGSVGGLTLASRVLALVRDSLAARYVGAGFASDAFNGVAFRLPNMFRALFAEGAF 61

Query: 68  SQAFVPVLTEYHASGDINKTRDLIARASGTLGVLVTIVTLIGVLGSGAVTALFGAGWFLD 127
           S AF+P+  +  A        D    A   L VL+ ++ L  ++       L  A W + 
Sbjct: 62  SAAFIPLFNKKAAGP--GGMADGYHFAERALAVLLPVLILFTIV-------LLAAAWPIT 112

Query: 128 W-LNGG-----PAAGKFELASLLLKITFPYLWFITFVALSGAILNTLGKFAVSSFTPVFL 181
           W L+GG     P   +F  A  L +IT PYL  I+  +L G ILN+L KF V++  P+ L
Sbjct: 113 WALSGGFSRQNPTPDQFAFAVTLSRITIPYLALISLASLLGGILNSLDKFWVNAAAPILL 172

Query: 182 NVMMILCAWYLSPNLEQPEVGL-AIGVFLGGLVQFLFQLPFLIKAGVLVRPKWGWKDPGV 240
           NV MI   W+     E     + A+ V +GG +Q L+ +    +AGV ++ K    D  V
Sbjct: 173 NVAMIAGLWFFHGADEYETARVQAMSVTVGGALQLLWLIWACKRAGVSMKLKRPRLDADV 232

Query: 241 VKIRTLMIPALFGVSVSQINLLFDSFVASFL-QTGSISWLYYSDRLLEFPLGLFGIAIAT 299
            ++  L++PA  G   SQINLL  + ++ +L  +GSI+++YY+DRL + PLGL GI + T
Sbjct: 233 RELLRLIVPAAAGAGASQINLLISTALSGWLLASGSITYIYYADRLNQLPLGLIGIGLGT 292

Query: 300 VILPALSRKHVDAHSDGFAHTMDWGIRMVTFLGIPAMLGLMVLAKPMLMVLFMRGEFTPS 359
           ++LP +SR            T + GI +  FL +PA +  + +A+P++  LF  G F+  
Sbjct: 293 ILLPTISRMLSKGEDQAAMETQNRGIELALFLTLPATVAFITVAEPIVRGLFQYGRFSAE 352

Query: 360 DVEQASYSLLAYSSGLLSFMLIKVLAPGYYSRQDTKTPVRYGIIAMVSNIVLNAIFAWFY 419
           D  +  ++L A+S GL S++L+KVL PGYY+R DTKTPVRY ++++  NIV N       
Sbjct: 353 DAMRCGWALSAFSIGLPSYVLVKVLTPGYYARGDTKTPVRYAMLSIAINIVGNLAMIPTL 412

Query: 420 GYVGLAVATSMSAFLNMALLYRGLHLQGVYHLTRKTVWFVARLAMAGAVMTGALLWQLDT 479
           G++G  +AT++S+ +N+A+LYR L  +G +    +    + RLA+A  VM  AL    D 
Sbjct: 413 GHIGPPLATALSSTVNVAMLYRTLVARGHFTADPQLRRRIPRLAVAAVVMGVALWAGEDL 472

Query: 480 MATWLSWGISQRALTLTGLIGLGVASY-LAILLLLGVRLKDLKA 522
           +   LS  +  R + L  L+G GVA Y LA  +    RL DLKA
Sbjct: 473 LDPMLSGPMVGRYIGLALLVGAGVALYGLACFVTGAYRLSDLKA 516