Pairwise Alignments

Query, 525 a.a., lipid II flippase MurJ from Vibrio cholerae E7946 ATCC 55056

Subject, 519 a.a., Proposed peptidoglycan lipid II flippase MurJ from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  348 bits (894), Expect = e-100
 Identities = 210/526 (39%), Positives = 306/526 (58%), Gaps = 31/526 (5%)

Query: 10  LLKSGIIVSAMTLISRVLGLVRDVVVANLMGAGASADVFFFANRIPNFLRRLFAEGAFSQ 69
           L KS  +VS +TL SR+ GLVR++++A + GA A  D F  A RIPN LRRLFAEGAFSQ
Sbjct: 3   LFKSASLVSLLTLASRITGLVRELLMAAMFGASALTDAFNVAFRIPNLLRRLFAEGAFSQ 62

Query: 70  AFVPVLTEYHASGDINKTRDLIARASGTLGVLVTIVTLIGVLGSGAVTALFGAGWFLDWL 129
           AFVPVL         + TR L+ + +  L   +T+  ++GV+G+  +     +G  LD  
Sbjct: 63  AFVPVLAGVREKEGDDATRVLVDQIATVLAWALTVTCVLGVVGAPVLVWAMASG--LD-- 118

Query: 130 NGGPAAGKFELASLLLKITFPYLWFITFVALSGAILNTLGKFAVSSFTPVFLNVMMILCA 189
              P    F+ A  + +  FPY+ F++FVALS  ILNT  +FAV + TPV LNV MI  A
Sbjct: 119 --DPG---FDAAVFMTRWMFPYIAFMSFVALSAGILNTWKRFAVPAATPVLLNVAMIAAA 173

Query: 190 -----WYLSPNLEQPEVGLAIGVFLGGLVQFLFQLPFLIKAGVLVRP-------KWGWKD 237
                W+ S  +E P   +A GV LGG +Q   Q+P L + G+L R        K  W  
Sbjct: 174 GWGAPWFASLGIE-PIYAMAGGVLLGGALQLGVQIPALRRLGLLPRVSLRWSALKTAWHH 232

Query: 238 PGVVKIRTLMIPALFGVSVSQINLLFDSFVASFLQTGSISWLYYSDRLLEFPLGLFGIAI 297
           PG  ++ TLM+PAL GVSV+QI+LL ++ +AS L  GS+SWL Y+DRL+EFP  + G+A+
Sbjct: 233 PGTQRVTTLMLPALLGVSVAQISLLINTQIASHLGAGSVSWLTYADRLMEFPTAMLGVAL 292

Query: 298 ATVILPALSRKHVDAHSDGFAHTMDWGIRMVTFLGIPAMLGLMVLAKPMLMVLFMRGEFT 357
             V+LP L+       +D ++  +DWG+R+V  L +P  + L+  A+P++ VL+  G FT
Sbjct: 293 GVVLLPQLAAAKASDDTDRYSGLLDWGLRLVVLLAVPCAVALLTFAQPLVAVLYHYGAFT 352

Query: 358 PSDVEQASYSLLAYSSGLLSFMLIKVLAPGYYSRQDTKTPVRYGIIAMVSNIVLNAIFAW 417
            +DV++ + +L+ Y +GL+  + IKVLAPG+Y+RQD +TPV+  I  +V   VLN +   
Sbjct: 353 AADVQRTATALMGYGAGLIGLVAIKVLAPGFYARQDIRTPVKIAIGVLVLTQVLNFLLVP 412

Query: 418 FYGYVGLAVATSMSAFLNMALLYRGLHLQGVYHLTRKTVWFVARLAMAGAVMTGALLWQL 477
              + GLA+A  + A +N   L  GL  +G Y  +     F  ++  A A++   L+W  
Sbjct: 413 RLAHAGLALAIGIGAMVNALFLLVGLIRRGAYKPSPGWARFGMQVLAASALLAVFLMW-- 470

Query: 478 DTMATWLSW-GISQRALTLTGLIGL----GVASYLAILLLLGVRLK 518
             +A   +W G   +AL   GL+ L    GV  Y   LLL G+ L+
Sbjct: 471 --VAARFNWLGFEGQALQRVGLLTLCVLGGVLVYFLTLLLAGLNLR 514