Pairwise Alignments

Query, 525 a.a., lipid II flippase MurJ from Vibrio cholerae E7946 ATCC 55056

Subject, 515 a.a., murein biosynthesis integral membrane protein MurJ from Magnetospirillum magneticum AMB-1

 Score =  300 bits (767), Expect = 1e-85
 Identities = 182/509 (35%), Positives = 292/509 (57%), Gaps = 16/509 (3%)

Query: 10  LLKSGIIVSAMTLISRVLGLVRDVVVANLMGAGASADVFFFANRIPNFLRRLFAEGAFSQ 69
           L +S   +   T++SRV GL+R++++A+ +GAGA AD FF A R PN  R LFAEGAF+ 
Sbjct: 3   LFRSIATIGGFTMLSRVTGLMREMMIAHFLGAGAVADAFFVAFRFPNLFRSLFAEGAFNA 62

Query: 70  AFVPVLTEYHASGDINKTRDLIARASGTLGVLVTIVTLIGVLGSGAVTALFGAGWFLDWL 129
           AFVP+ T    +      R    ++   LG+ + +   + V+      A++G     D +
Sbjct: 63  AFVPLFTGKMTAEGTESARRFAEQSFAVLGLALAL--FVAVMELAMPWAIYGLAPGFDTV 120

Query: 130 NGGPAAGKFELASLLLKITFPYLWFITFVALSGAILNTLGKFAVSSFTPVFLNVMMILCA 189
                 GK  LA    +I FPYL FI+ V+L   +LN++G+FA ++ TPV LN+  +   
Sbjct: 121 -----PGKMALAVEFSRICFPYLLFISLVSLQAGVLNSMGRFAAAAATPVLLNLTSMAGL 175

Query: 190 WYLSPNLEQPEVGLAIGVFLGGLVQFLFQLPFLIKAGV---LVRPKWGWKDPGVVKIRTL 246
           W+L P  E     +A G F  G+VQF++      + G+   LVRP+     P V  +   
Sbjct: 176 WFLVPYSETAGHAMAWGTFAAGVVQFVWLSRAARRVGMGLGLVRPRL---TPEVKLLFKR 232

Query: 247 MIPALFGVSVSQINLLFDSFVASFLQTGSISWLYYSDRLLEFPLGLFGIAIATVILPALS 306
           ++P   G  V Q+NL+ ++ +AS +  G++S+L Y+DR+ + PLG+ GIAI T +LP LS
Sbjct: 233 IVPGAVGAGVYQVNLVINTMIASTVADGAVSYLNYADRVNQLPLGVVGIAIGTALLPTLS 292

Query: 307 RKHVDAHSDGFAHTMDWGIRMVTFLGIPAMLGLMVLAKPMLMVLFMRGEFTPSDVEQASY 366
           R+     ++    + +  + +   L +PA + LMV+A P++ VLF RG F P++    + 
Sbjct: 293 RQLKAGEAEAARTSQNRAMELGLALTLPAAVALMVIAAPVIRVLFERGSFGPNETAATAS 352

Query: 367 SLLAYSSGLLSFMLIKVLAPGYYSRQDTKTPVRYGIIAMVSNIVLNAIFAWFYGYVGLAV 426
           +L+A++ GL +++L+KVL PG+++R+DT TPVR   +AMV N+VLN   A   G+VG+A+
Sbjct: 353 ALVAFAIGLPAYVLVKVLVPGFFAREDTGTPVRVAGVAMVLNVVLNLSLAKPLGHVGMAL 412

Query: 427 ATSMSAFLNMALLYRGLHLQGVYHLTRKTVWFVARLAMAGAVMTGALLWQLDTMATW-LS 485
           AT+++A+ N+ +L   L  +G + +  +      R+  A AVM G +LW    +A W L+
Sbjct: 413 ATAIAAWANVLILAVLLARRGFFTVDERLKSKAPRILAACAVM-GGVLWG-GKLALWPLA 470

Query: 486 WGISQRALTLTGLIGLGVASYLAILLLLG 514
            G       L GL+ LG  ++LA   +LG
Sbjct: 471 QGQLMAVGVLAGLVVLGAIAFLAAAQMLG 499