Pairwise Alignments

Query, 525 a.a., lipid II flippase MurJ from Vibrio cholerae E7946 ATCC 55056

Subject, 511 a.a., murein biosynthesis integral membrane protein MurJ from Escherichia coli ECRC62

 Score =  404 bits (1039), Expect = e-117
 Identities = 213/515 (41%), Positives = 320/515 (62%), Gaps = 7/515 (1%)

Query: 10  LLKSGIIVSAMTLISRVLGLVRDVVVANLMGAGASADVFFFANRIPNFLRRLFAEGAFSQ 69
           LLKS   VS+MT+ SRVLG  RD +VA + GAG + D FF A ++PN LRR+FAEGAFSQ
Sbjct: 3   LLKSLAAVSSMTMFSRVLGFARDAIVARIFGAGMATDAFFVAFKLPNLLRRIFAEGAFSQ 62

Query: 70  AFVPVLTEYHASGDINKTRDLIARASGTLGVLVTIVTLIGVLGSGAVTALFGAGWFLDWL 129
           AFVP+L EY +    + TR  ++  SG L + + +VT+ G+L +  V  +   G+     
Sbjct: 63  AFVPILAEYKSKQGEDATRVFVSYVSGLLTLALAVVTVAGMLAAPWVIMVTAPGF----- 117

Query: 130 NGGPAAGKFELASLLLKITFPYLWFITFVALSGAILNTLGKFAVSSFTPVFLNVMMILCA 189
                A KF L S LLKITFPY+  I+  +L GAILNT  +F++ +F P  LN+ MI  A
Sbjct: 118 --ADTADKFALTSQLLKITFPYILLISLASLVGAILNTWNRFSIPAFAPTLLNISMIGFA 175

Query: 190 WYLSPNLEQPEVGLAIGVFLGGLVQFLFQLPFLIKAGVLVRPKWGWKDPGVVKIRTLMIP 249
            + +P    P + LA  V +GG++Q ++QLP L K G+LV P+  + D G +++   M P
Sbjct: 176 LFAAPYFNPPVLALAWAVTVGGILQLVYQLPHLKKIGMLVLPRINFHDAGAMRVVKQMGP 235

Query: 250 ALFGVSVSQINLLFDSFVASFLQTGSISWLYYSDRLLEFPLGLFGIAIATVILPALSRKH 309
           A+ GVSVSQI+L+ ++  ASFL +GS+SW+YY+DRL+EFP G+ G+A+ T++LP+LS+  
Sbjct: 236 AILGVSVSQISLIINTIFASFLASGSVSWMYYADRLMEFPSGVLGVALGTILLPSLSKSF 295

Query: 310 VDAHSDGFAHTMDWGIRMVTFLGIPAMLGLMVLAKPMLMVLFMRGEFTPSDVEQASYSLL 369
              + D +   MDWG+R+   L +P+ + L +L+ P+ + LF  G+FT  D      +L+
Sbjct: 296 ASGNHDEYNRLMDWGLRLCFLLALPSAVALGILSGPLTVSLFQYGKFTAFDALMTQRALI 355

Query: 370 AYSSGLLSFMLIKVLAPGYYSRQDTKTPVRYGIIAMVSNIVLNAIFAWFYGYVGLAVATS 429
           AYS GL+  +++KVLAPG+YSRQD KTPV+  I+ ++   ++N  F     + GL+++  
Sbjct: 356 AYSVGLIGLIVVKVLAPGFYSRQDIKTPVKIAIVTLILTQLMNLAFIGPLKHAGLSLSIG 415

Query: 430 MSAFLNMALLYRGLHLQGVYHLTRKTVWFVARLAMAGAVMTGALLWQLDTMATWLSWGIS 489
           ++A LN +LLY  L  Q ++      + F+ RL +A  VM+G LL  L  M  W    + 
Sbjct: 416 LAACLNASLLYWQLRKQKIFTPQPGWMAFLLRLVVAVLVMSGVLLGMLHIMPEWSLGTMP 475

Query: 490 QRALTLTGLIGLGVASYLAILLLLGVRLKDLKAAT 524
            R L L  ++  G+A+Y A L +LG ++K+    T
Sbjct: 476 WRLLRLMAVVLAGIAAYFAALAVLGFKVKEFARRT 510