Pairwise Alignments

Query, 525 a.a., lipid II flippase MurJ from Vibrio cholerae E7946 ATCC 55056

Subject, 511 a.a., murein biosynthesis integral membrane protein MurJ from Dickeya dadantii 3937

 Score =  390 bits (1001), Expect = e-113
 Identities = 206/510 (40%), Positives = 314/510 (61%), Gaps = 7/510 (1%)

Query: 10  LLKSGIIVSAMTLISRVLGLVRDVVVANLMGAGASADVFFFANRIPNFLRRLFAEGAFSQ 69
           LLKS   VS+MTL+SRVLG VRD +VA + GAG + D FF A ++PN LRR+FAEGAFSQ
Sbjct: 3   LLKSLAAVSSMTLLSRVLGFVRDAIVARVFGAGMATDAFFVAFKLPNLLRRIFAEGAFSQ 62

Query: 70  AFVPVLTEYHASGDINKTRDLIARASGTLGVLVTIVTLIGVLGSGAVTALFGAGWFLDWL 129
           AFVP+L EY +      TR  +A  SG L +++ +VT+ G+L +  V  +   G+     
Sbjct: 63  AFVPILAEYKSQQGEEATRTFLAYVSGMLTLILALVTVAGMLAAPWVIMVTAPGF----- 117

Query: 130 NGGPAAGKFELASLLLKITFPYLWFITFVALSGAILNTLGKFAVSSFTPVFLNVMMILCA 189
                  +FEL S LL+ITFPY+  I+  +++G++LNT  +F+V +F P  LN+ MI  A
Sbjct: 118 --ASTPERFELTSALLRITFPYILLISLTSMAGSVLNTWNRFSVPAFAPTLLNISMIGFA 175

Query: 190 WYLSPNLEQPEVGLAIGVFLGGLVQFLFQLPFLIKAGVLVRPKWGWKDPGVVKIRTLMIP 249
              +     P + L   V  GG++Q  +QLP L K G+LV P+  ++DP V ++  LM P
Sbjct: 176 LLGARWFNPPVMALGWAVVAGGVLQLGYQLPHLKKIGMLVLPRIKFRDPSVSRVMKLMAP 235

Query: 250 ALFGVSVSQINLLFDSFVASFLQTGSISWLYYSDRLLEFPLGLFGIAIATVILPALSRKH 309
           A+ GVSVSQI+L+ ++  ASFL  G++SW+YY+DRL+EFP G+ G+A+ T++LP+LS+  
Sbjct: 236 AILGVSVSQISLIINTIFASFLSQGAVSWMYYADRLMEFPSGVLGVALGTILLPSLSKSV 295

Query: 310 VDAHSDGFAHTMDWGIRMVTFLGIPAMLGLMVLAKPMLMVLFMRGEFTPSDVEQASYSLL 369
              +   ++  +DWG+R+   L +PA + L +LAKP+ + LF  G+F+  D      +L+
Sbjct: 296 ASGNHQEYSRLLDWGLRLCFLLALPATVALGLLAKPLTVALFQYGKFSAFDALMTQRALV 355

Query: 370 AYSSGLLSFMLIKVLAPGYYSRQDTKTPVRYGIIAMVSNIVLNAIFAWFYGYVGLAVATS 429
           AYS GL+  +L+KVL PG+Y+RQD KTPV+ G+  +    ++N IF     + GL+++  
Sbjct: 356 AYSIGLMGLILVKVLVPGFYARQDIKTPVKIGMATLAMTQLMNLIFIGPLQHAGLSLSIG 415

Query: 430 MSAFLNMALLYRGLHLQGVYHLTRKTVWFVARLAMAGAVMTGALLWQLDTMATWLSWGIS 489
           +++ +N  LL+  L  Q ++   +    F+ +L +A  VM+  L+     M  W    ++
Sbjct: 416 LASCINAGLLFWQLRRQRIFEPQQGWTAFLIKLVIAVIVMSLVLIALCLWMPPWEQGNMT 475

Query: 490 QRALTLTGLIGLGVASYLAILLLLGVRLKD 519
            R L L  ++  G  SY A+L LLG R KD
Sbjct: 476 MRLLRLLAVVVAGAGSYFAMLALLGFRPKD 505