Pairwise Alignments

Query, 525 a.a., lipid II flippase MurJ from Vibrio cholerae E7946 ATCC 55056

Subject, 531 a.a., murein biosynthesis integral membrane protein MurJ from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  216 bits (551), Expect = 1e-60
 Identities = 170/532 (31%), Positives = 264/532 (49%), Gaps = 37/532 (6%)

Query: 10  LLKSGIIVSAMTLISRVLGLVRDVVVANLMGAGASADVFFFANRIPNFLRRLFAEGAFSQ 69
           L ++ ++ S +TL SR+LG VRD+ +A   G G   D F  A  +PN  RRLFAEGAF+Q
Sbjct: 3   LARNTLVQSTLTLGSRILGFVRDMALAARFGQGPMMDAFTTALMLPNMFRRLFAEGAFAQ 62

Query: 70  AFVPVLTEYHASGDINKTRDLIARASGTLGVLVTIVTLIGVLGSGAVTALFGAGWFLDWL 129
           AFVPV     A             AS  L  ++ +V    +L    +  +    W L   
Sbjct: 63  AFVPVYGGVRAR---EGEEAAAVTASEALSFMLAVVAGFCILLQVVMPWIMP--WLLSAY 117

Query: 130 NGGPAAGKFELASLLLKITFPYLWFITFVALSGAILNTLGKFAVSSFTPVFLNVMMILCA 189
            G P       A +  ++  PYL  +T  +L   +LNT G+FA+S+  PVFLN+  +  A
Sbjct: 118 QGQPEV--LRAAVIATQLAMPYLACMTVASLLSGVLNTGGRFALSAAVPVFLNLCTL--A 173

Query: 190 WYLSP---NLEQPEVGLAI--GVFLGGLVQFLFQLPFLIKAGVLVRPKWGWKDPGVVKIR 244
             + P    + Q  V L +   V + GL+Q       + + GV ++       P V    
Sbjct: 174 ALMPPVILPIPQETVLLMVTAAVTVSGLIQAGLLWWGVRRLGVRLKIGLPRITPNVRHTL 233

Query: 245 TLMIPALFGVSVSQINLLFDSFVASFLQTGSISWLYYSDRLLEFPLGLFGIAIATVILPA 304
            L +P        QIN L   F+      G+ S LY +DRL + PLGL G+AI   ++P 
Sbjct: 234 ALAVPGALAGGALQINSLVSQFLTGS-DEGARSVLYNADRLYQLPLGLVGVAIGLALVPR 292

Query: 305 LSRKHVDAHSDGFAHTMDWGIRMVTFLGIPAMLGLMVLAKPMLMVLFMRGEFTPSDVEQA 364
           L++  VD   +G   T+D GI +     +PA + L V+   ++     RG FT +D  + 
Sbjct: 293 LTKAFVDGDHEGGQKTLDDGINLAMAFTLPAAVALFVIPFFIIDATVTRGAFTSADAART 352

Query: 365 SYSLLAYSSGLLSFMLIKVLAPGYYSRQDTKTPVRYGIIAMVSNIVL-NAIFAWFY---- 419
           +  L  ++ G+ +F+L KVL P +++RQDT+ P+ + + ++V  ++L +A+F WF     
Sbjct: 353 ADVLRQFAWGVPAFVLAKVLTPPFFARQDTRRPMIFAVASVVITVILGSALFFWFRRQGW 412

Query: 420 -GYVGLAVATSMSAFLNMALLYRGLHLQGVYHLTRKTVW-----FVARLA--MAGAVMTG 471
            G +GLA+ATS SA++N+AL      L GV  L R+  W     F++R+A  +A + M  
Sbjct: 413 DGVLGLAIATSTSAWVNVAL------LGGV--LIRENSWRPSPAFLSRIARVIAASAMMA 464

Query: 472 ALLWQLDTMATWLSWGISQRALTLTGLIGLGVASY-LAILLLLGVRLKDLKA 522
           ALL+  D     LS     + + +  + G G   Y   +L    V + +LKA
Sbjct: 465 ALLFAADVFYPQLSRLFLAKEIAVLVVCGAGAGLYGFCLLAFRAVTISELKA 516