Pairwise Alignments

Query, 525 a.a., lipid II flippase MurJ from Vibrio cholerae E7946 ATCC 55056

Subject, 513 a.a., putative lipid II flippase MurJ from Acinetobacter radioresistens SK82

 Score =  412 bits (1059), Expect = e-119
 Identities = 226/523 (43%), Positives = 327/523 (62%), Gaps = 24/523 (4%)

Query: 10  LLKSGIIVSAMTLISRVLGLVRDVVVANLMGAGASADVFFFANRIPNFLRRLFAEGAFSQ 69
           L +S  IVSAMT++SRVLGLVRDVV+ N+ GAG   D F  A RIPNF RRLFAEGAFSQ
Sbjct: 3   LWRSTFIVSAMTMLSRVLGLVRDVVLLNVFGAGKDFDTFVVAFRIPNFFRRLFAEGAFSQ 62

Query: 70  AFVPVLTEYHASGDINKTRDLIARASGTLGVLVTIVTLIGVLGSGAVTALFGAGWFLDWL 129
           AF+PVLTEY  S    + + LI+R  G L  ++T++T I ++ + A+  ++  G+  D  
Sbjct: 63  AFIPVLTEYKTSRTHAEVQILISRVFGCLLTVMTLLTFIAMVAAPAILYIYAPGFHDD-- 120

Query: 130 NGGPAAGKFELASLLLKITFPYLWFITFVALSGAILNTLGKFAVSSFTPVFLNVMMILCA 189
              PA  KF+LA  + ++T PYL F++  A + +ILN+ G F+  +F+PV LNV MI  A
Sbjct: 121 ---PA--KFDLAVDMFRLTIPYLMFMSLTAFASSILNSYGSFSTPAFSPVLLNVAMIAGA 175

Query: 190 WYLSPNLEQPEVGLAIGVFLGGLVQFLFQLPFLIKAGVLVRPKWGWKDPGVVKIRTLMIP 249
           W+L+P + +P + L   V + G++Q   Q+P L +  +L+ PK  +K  GV +I  LM+P
Sbjct: 176 WWLTPYMAEPIMALGWAVVVAGILQLAIQIPELWRKKLLIPPKVDFKHEGVERILKLMLP 235

Query: 250 ALFGVSVSQINLLFDSFVASFLQTGSISWLYYSDRLLEFPLGLFGIAIATVILPALSRKH 309
           ALFGVSV+QINLL ++  ASF+Q GS+SWLY ++R+ E PLGL G+AI TVILP+LS +H
Sbjct: 236 ALFGVSVTQINLLLNTIWASFMQDGSVSWLYSAERMTELPLGLIGVAIGTVILPSLSARH 295

Query: 310 VDAHSDGFAHTMDWGIRMVTFLGIPAMLGLMVLAKPMLMVLFMRGEFTPSDVEQASYSLL 369
            +     F   +DW  R++  +GIPA + L +L+ P++  LF RGEFT  D +  + +L 
Sbjct: 296 AEQDQTKFRGMLDWAARVIMLVGIPASIALFMLSTPIIQALFERGEFTWEDTQMTALALQ 355

Query: 370 AYSSGLLSFMLIKVLAPGYYSRQDTKTPVRYGIIAMVSNIVLNAIFA-------WFYGYV 422
             S+G+++FMLIKV APG+Y++QDTKTPVR G+IA+ +N +LN +F        W   ++
Sbjct: 356 CMSAGVIAFMLIKVFAPGFYAQQDTKTPVRVGLIAVATNAILNIVFIGFFKLINWHAEHM 415

Query: 423 GLAVATSMSAFLNMALLYRGLHLQGVY----HLTRKTVWFVARLAMAGAVMTGALLWQLD 478
            LA+A+S SA  N  LLY  LH + ++    H  +  + FV    +    +   L W   
Sbjct: 416 ALALASSGSALANAGLLYYYLHKRNIFRFGSHWKKLFIQFVVANTIMATALWFGLQWYNG 475

Query: 479 TMATWLSWGISQRALTLTGLIGLGVASYLAILLLLGVRLKDLK 521
            ++ WL      R   + GL  +GV +Y   LL+ G   + LK
Sbjct: 476 ELSQWL------RVAEVAGLCIVGVLAYAIGLLVSGFHPRQLK 512