Pairwise Alignments

Query, 296 a.a., transcriptional activator protein NhaR from Vibrio cholerae E7946 ATCC 55056

Subject, 287 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score = 63.9 bits (154), Expect = 4e-15
 Identities = 58/221 (26%), Positives = 92/221 (41%), Gaps = 5/221 (2%)

Query: 15  VCKQGSVTKAADALFLTPQTVTGQIKALEDRLDGKLTKRNGRSIEPTELGQLVFKYADRM 74
           + + G+  +AAD L LTP  V+  IK LED L   L  R+ R +  TE GQL    A+ +
Sbjct: 12  IARHGTFARAADLLSLTPSAVSLHIKTLEDELKVTLFDRSRRQVVLTEAGQLAVARAESL 71

Query: 75  FGLSYEMLDIVNYSQRSNLLFDVGVADALSKRLVSKILLTSVPGDNRIHLRCFESTHEML 134
                E+ D +           +G    +  R + K L+       ++H+         L
Sbjct: 72  LAAYDELADALASGPSLRGRLRLGAIHTVLARRLPKALVWIKAHHPQLHISVASGMSAEL 131

Query: 135 LEQLAQHKLDMILSDCPVDSSQSPGLFSKKLGESRMSFFSFGDVDFAPF--PAVLQSKKL 192
             ++   +LD  ++  PV S     L    L E R  F++    + A +  P +L S+  
Sbjct: 132 ARRVEDGELDAAITTEPV-SPYPQNLDFTPLFEDR--FWAIASPELAGYSVPQLLASQPF 188

Query: 193 LVPGSRTAMGRKVRQWFDRQGLQPHILGEFDDSALMKAFAI 233
           L    R   GR++ Q   RQ +Q   L E D    +   A+
Sbjct: 189 LRFDKRAWAGRQIEQELRRQQVQVSELMELDSQEALARMAV 229