Pairwise Alignments

Query, 296 a.a., transcriptional activator protein NhaR from Vibrio cholerae E7946 ATCC 55056

Subject, 287 a.a., LysR family transcriptional regulator from Pseudomonas putida KT2440

 Score = 57.8 bits (138), Expect = 3e-13
 Identities = 67/232 (28%), Positives = 104/232 (44%), Gaps = 24/232 (10%)

Query: 4   LNYNHLYYFWMVCKQGSVTKAADALFLTPQTVTGQIKALEDRLDGKLTKRNGRSIEPTEL 63
           +N   L  F  V ++GS T+AA+ LF++   VTG +KALE+     L +R  R +E TE 
Sbjct: 1   MNLFQLRAFDAVAREGSFTRAAERLFISQPAVTGHVKALEEHYQITLLRRTARRVELTEE 60

Query: 64  GQLVFKYADRMFGLSYEMLDIVNYSQRSNLLFDVGVADALSKRLVSKILL--TSVPGDNR 121
           G  +      MFGL+ E   ++  + R  L   + VA     R++  + L     PG   
Sbjct: 61  GTRLAAITRAMFGLAEEAQAMLE-ANRQLLTGRLEVAADGPHRVMPMLALLRERYPGVT- 118

Query: 122 IHLRCFESTHEMLLEQLAQHKLDMILSDCPVDSSQSPGLFSKKLGESRM-SFFSFGDV-- 178
           ++LR   +  E L   L +H    +L++         GL  + L ESR+ +    G    
Sbjct: 119 VNLR-LGNAQETLAALLGEHADVAVLTEI----EPRKGLHLQNLCESRLCALLPVGHAWA 173

Query: 179 ---DFAPFPAVLQSKKLLVPGSRTAMGRKVRQWFD----RQGLQPHILGEFD 223
              +  P  A+ Q   +L   S T      R+ FD    + G+QP +L E D
Sbjct: 174 SAREDLPLAALHQQIMVLREPSST-----TRRTFDKACIKAGVQPRVLLELD 220