Pairwise Alignments

Query, 296 a.a., transcriptional activator protein NhaR from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., Transcriptional regulator PcaQ from Pseudomonas putida KT2440

 Score = 57.0 bits (136), Expect = 5e-13
 Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 1/170 (0%)

Query: 2   SHLNYNHLYYFWMVCKQGSVTKAADALFLTPQTVTGQIKALEDRLDGKLTKRNGRSIEPT 61
           + + Y HL  F  + +QGS+ +AAD L ++   ++  +K LED L+ +L +R+ + +E T
Sbjct: 5   TRIKYRHLLCFLEIARQGSLARAADILSISQPAISKTLKELEDLLEARLFERSRQGVELT 64

Query: 62  ELGQLVFKYADRMFGLSYEMLDIVNYSQRSNLLFDVGVADALSKRLVSKILLTSVPGDNR 121
             G    +YA        + +  +    R+     +GV   +   L+ ++L         
Sbjct: 65  PAGTRFMRYAGPSVQALRDGVSSLRGEARAPSQVRIGVLSTVEGLLMPEVLCRLHQRHEA 124

Query: 122 IHLRCFESTHEMLLEQLAQHKLDMILSDCPVDSSQSPGLFSKKLGESRMS 171
           + +         LL QL   +L++++     DS Q  GL  + L    MS
Sbjct: 125 LVISVVTGVSAQLLGQLHLGELELVVGRM-TDSPQIQGLSFEHLYSESMS 173