Pairwise Alignments

Query, 296 a.a., transcriptional activator protein NhaR from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., transcriptional regulator from Magnetospirillum magneticum AMB-1

 Score = 52.0 bits (123), Expect = 2e-11
 Identities = 60/241 (24%), Positives = 101/241 (41%), Gaps = 25/241 (10%)

Query: 4   LNYNHLYYFWMVCKQGSVTKAADALFLTPQTVTGQIKALEDRLDGKLTKRNGRSIEPTEL 63
           ++   L YF  + + GS+TKAA+AL +    ++  +K LE+     L  R  R + PTE 
Sbjct: 1   MDIRQLRYFLGIVEHGSLTKAAEALHVAQPALSLHLKRLEEEFGCPLVHRTARGVVPTES 60

Query: 64  GQLVFKYA----DRMFGLSYEMLDIVNYSQRSNLLFDVGVADALSKRLVSKILLTSVPGD 119
           G  +   A    +RM  L  E+  +        +   +G+  +L   L   + L      
Sbjct: 61  GLRLAVRAGVLVERMANLKDEIRGLEAAPAGPAV---IGIPTSLGPMLTVPLALAVRRLH 117

Query: 120 NRIHLRCFESTHEMLLEQLAQHKLDMILSDCPVDSSQSP-GLFSKKLGESRMSFF----- 173
             IHLR  E     +LE +    +DM L    V  S+ P GL ++ +   R++       
Sbjct: 118 PSIHLRVVEGLSGHMLEWVLSGSVDMAL----VFGSEHPAGLATRFIARERLALVGPKDD 173

Query: 174 ----SFGDVDFAPFPAVLQSKKLLVPGSRTAMGRKVRQWFDRQGLQPHILGEFDDSALMK 229
                  D+D A   A+     L++PG    +  +V +     G +P ++ E D    +K
Sbjct: 174 PLLNGRRDMDLAHVLAL----PLILPGRPHGVRAEVERAGRALGTEPSVVIEIDALDQIK 229

Query: 230 A 230
           A
Sbjct: 230 A 230