Pairwise Alignments

Query, 444 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 470 a.a., Transcriptional regulatory protein ZraR from Xanthobacter sp. DMC5

 Score =  179 bits (455), Expect = 1e-49
 Identities = 129/402 (32%), Positives = 200/402 (49%), Gaps = 38/402 (9%)

Query: 65  FSLNGIANLVSSHKQVRWLAFIREAQLSSDTICQFIVNFC-------------IDFFTAP 111
           F L  + N+++    ++WL  +R +    D I   I  F               DF   P
Sbjct: 77  FDLIILDNIMAGRTGLQWLEELRGSGFYRDVI--LITAFADLETAITALRAGAADFVLKP 134

Query: 112 IPDAQLLSTIGHQLG---------MLKLEKKVWPHFGSAGNMGLIGESMPMKRLRDQIKR 162
               Q+L+ I   L          +L+ E K  P  G+A  + + G S+  + +R  I+R
Sbjct: 135 FRSNQILNAIARCLDRGRLMRENFVLRRELKAMP--GAAAPL-MAGNSVSTRAVRAMIER 191

Query: 163 IGPTDVSILIYGESGTGKETVAKAIHKTSSRAQKPFISVNCRAMSEKRLESELFG----- 217
           +GP   ++LI GESGTGKE  A+A+H  S+RA KPF+ VNC A++ + +ESELFG     
Sbjct: 192 VGPMPSTVLITGESGTGKEVTARALHAVSARAAKPFVPVNCAAIAPEIIESELFGHLKGA 251

Query: 218 LGETEEGQQPFLLQADGGTLLLNDILTLPKSQQLNLLRFLQEGTVETRQGVRA--VDVRI 275
                  ++     A GGTL L+++  LP + Q  LLR +++  V      R   VDVR+
Sbjct: 252 FTGAASSREGLFFYAQGGTLFLDEVGELPPAMQSKLLRVIEDRKVRPVGAEREIPVDVRL 311

Query: 276 LAANSSDIEKALIDGDFNEELYHYINVLRINVPSLKERASDIVLLAKHFLQEYSKEYNAQ 335
           +AA ++++   +  G F ++LY+ +NV+ I++  L+ER  D+  LA  F+ E S      
Sbjct: 312 VAATNANLTAQVAAGRFRQDLYYRLNVVNIHLAPLRERPEDVAPLAHMFIAELSARLGVP 371

Query: 336 ARSFSDDAVRGLTRYHWPGNVRELMNQIKRVVLMSDTVVLDESQLDLPKRSDGRRSLKSI 395
               ++  +  LTRY WPGNVREL N I+R +++ D    D     + +  D   S    
Sbjct: 372 PLDLTEPVLTFLTRYPWPGNVRELRNVIERSLILGD-FPRDVVPEGVAEEEDAPGSALDA 430

Query: 396 RERSERDALLLVLESHSGQVSTAAKELGVSRATMYRLLNKHN 437
            E++    +L VL    G  + AA+ L VSR T+ R L   N
Sbjct: 431 VEKAH---MLKVLAEAGGNRAEAARRLKVSRKTLDRKLKAWN 469