Pairwise Alignments

Query, 444 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 462 a.a., Transcriptional response regulatory protein GlrR from Variovorax sp. SCN45

 Score =  204 bits (520), Expect = 4e-57
 Identities = 125/341 (36%), Positives = 187/341 (54%), Gaps = 9/341 (2%)

Query: 107 FFTAPIPDAQLLSTIGHQLGMLKLEKKVWPHFGSAGNMGLIGESMPMKRLRDQIKRIGPT 166
           + T P    +LL  I   L +             +    ++  S  M  L  + + +  +
Sbjct: 103 YLTKPYDGRELLDKIAQALALGAPATTPSKAGDDSWRSEIVSRSNRMAELLAEARMVAKS 162

Query: 167 DVSILIYGESGTGKETVAKAIHKTSSRAQKPFISVNCRAMSEKRLESELFG-----LGET 221
           D S+L+ G+SG GKE +A+AIHK S+RA KPF++VNC A+ E  LESELFG       + 
Sbjct: 163 DASVLLRGDSGAGKELLARAIHKASARADKPFVAVNCGAIPEALLESELFGHMKGAFTDA 222

Query: 222 EEGQQPFLLQADGGTLLLNDILTLPKSQQLNLLRFLQEGTVETRQGVRA--VDVRILAAN 279
               +    QADGGTLLL++I  +P + Q+ LLR LQE  V      ++  VDVRI++A 
Sbjct: 223 HANHKGLFQQADGGTLLLDEIGDMPPALQVKLLRVLQERAVRPLGASQSIQVDVRIVSAT 282

Query: 280 SSDIEKALIDGDFNEELYHYINVLRINVPSLKERASDIVLLAKHFLQEYSKEYNAQARSF 339
             D++ A+  G F E+LY+ +NV+ + +P L  R  DI LLA HFLQ  S +Y  +   F
Sbjct: 283 HRDLDAAMEAGQFREDLYYRLNVVTLTLPPLSARREDIPLLANHFLQRLSTKYGKRLSGF 342

Query: 340 SDDAVRGLTRYHWPGNVRELMNQIKRVVLMSDT--VVLDESQLDLPKRSDGRRSLKSIRE 397
           + +A++ LT   WPGNVR+L N +++V  +S +  + L   Q  L   S   ++    ++
Sbjct: 343 APEALKALTTAAWPGNVRQLFNVVEQVCALSSSPLIPLALVQRALRVPSVEVQTYAEAKQ 402

Query: 398 RSERDALLLVLESHSGQVSTAAKELGVSRATMYRLLNKHNL 438
           R ERD L+ +L+   G V+ AA+    +R   YRLL KH L
Sbjct: 403 RFERDYLVGLLKLTDGNVADAARLADRNRTEFYRLLQKHEL 443