Pairwise Alignments

Query, 444 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., Two-component system response regulator protein from Sphingobium sp. HT1-2

 Score =  206 bits (524), Expect = 1e-57
 Identities = 117/306 (38%), Positives = 184/306 (60%), Gaps = 16/306 (5%)

Query: 146 LIGESMPMKRLRDQIKRIGPTDVSILIYGESGTGKETVAKAIHKTSSRAQKPFISVNCRA 205
           +I  +  M R+   I+R+   DVS+++ G SGTGKE +A+ +H  S R    F+++NC A
Sbjct: 150 MITGASEMMRVARTIERVASADVSVMLLGASGTGKELLAQGLHDASPRRGGAFVAINCAA 209

Query: 206 MSEKRLESELFG--------LGETEEGQQPFLLQADGGTLLLNDILTLPKSQQLNLLRFL 257
           + E  LESELFG          +T  G+   + QA GGTL L+++  +P   Q+ LLRFL
Sbjct: 210 IPETLLESELFGHEKGAFTGAVKTTPGK---IEQAQGGTLFLDEVGDIPLPLQVKLLRFL 266

Query: 258 QEGTVETRQGVR--AVDVRILAANSSDIEKALIDGDFNEELYHYINVLRINVPSLKERAS 315
           QE  +E   G +  AVD RI+ A   D++  +    F E+LY+ +  + I +P+L++R  
Sbjct: 267 QERVIERIGGRQPIAVDTRIVCATHQDLDAMIAAASFREDLYYRLAEIVIRIPALRDRPG 326

Query: 316 DIVLLAKHFLQEYSKEYNAQARSFSDDAVRGLTRYHWPGNVRELMNQIKRVVLMSDTVVL 375
           D  LLA+HFL  ++++ N Q + F+ DA+  L  + WPGNVREL N++KR V+M+D   +
Sbjct: 327 DPALLARHFLTRFAQDMNPQVKGFAPDALAALDAWGWPGNVRELENRVKRAVIMADGKHV 386

Query: 376 DESQLDLP-KRSDGRR--SLKSIRERSERDALLLVLESHSGQVSTAAKELGVSRATMYRL 432
             + LDL   R++G    +LK+ RE ++R A+   +    G +S+AAK LG+SR T+Y L
Sbjct: 387 TAADLDLDGDRAEGSEVVNLKAAREMADRRAIRRAIARTDGNISSAAKILGISRPTLYDL 446

Query: 433 LNKHNL 438
           L ++ +
Sbjct: 447 LKQYKM 452