Pairwise Alignments

Query, 444 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 480 a.a., Nitrogen regulation protein NR(I), GlnG (=NtrC) from Sphingobium sp. HT1-2

 Score =  190 bits (482), Expect = 1e-52
 Identities = 144/476 (30%), Positives = 235/476 (49%), Gaps = 58/476 (12%)

Query: 7   MDSVPGSLVVVGGTYEPWLAVLEKVGWRCTQVADLRKADALFVETGPCIGIVDLS-HDEF 65
           +D  P   VVVG         L + G +      +R+  AL     P I I D+   D  
Sbjct: 10  VDDDPAICVVVG-------EALRRQGHKVKIAGSIRERMALMESFSPDILITDVMLPDGD 62

Query: 66  SLNGIANLVSSHKQVRWLAFIREAQLSSDTICQFIVNFCIDFFTAPIPDAQLLSTI---- 121
            L+G+A ++     +     I  AQ + +T  +       ++   P    +L   +    
Sbjct: 63  GLDGVAEIIERKPDLN--VIILSAQNTLNTAIRATEKGAFEYLPKPFDLNELTRAVADAL 120

Query: 122 GHQLGMLKLEKKVWPHFGSAGNMGLIGESMPMKRLRDQIKRIGPTDVSILIYGESGTGKE 181
           GH+ G     ++  PH G    + L+G S  M+ +   I R+   D+SIL+ GESGTGKE
Sbjct: 121 GHRSGGADAAEQGLPHDG----LPLVGRSPAMQEVYRTIARVLSNDLSILVLGESGTGKE 176

Query: 182 TVAKAIHKTSSRAQKPFISVNCRAMSEKRLESELFGLGE-----TEEGQQPFLLQADGGT 236
            VA+AIH    R  +PF+++N  A+  + +E+ELFG  +      +        QA GGT
Sbjct: 177 LVAEAIHSLGQRRTRPFVAINMAAIPRELIEAELFGYEKGAFTGAQARTAGKFEQAQGGT 236

Query: 237 LLLNDILTLPKSQQLNLLRFLQEGTVETRQGVR--AVDVRILAANSSDIEKALIDGDFNE 294
           L L++I  +P   Q  LLR LQ G V T  G +   VDVRI+AA + D+ + + +  F +
Sbjct: 237 LFLDEIGDMPMEAQTRLLRVLQSGEVTTVGGSKPVRVDVRIIAATNKDLPRLIEENRFRQ 296

Query: 295 ELYHYINVLRINVPSLKERASDIVLLAKHFLQEYSKEYNAQARSFSDDAVRGLTRYHWPG 354
           +LY+ +NV+ +++P L+ER  D++LLA+HFL   +++     ++ ++DA + L  YHWPG
Sbjct: 297 DLYYRLNVVPVSLPPLRERREDVILLARHFLDRAAQD-GLPRKALAEDAAQLLMAYHWPG 355

Query: 355 NVRELMNQIKRVVLMS--DTVVLDESQLDLPKRSD-------GRRSLKSIRERSER---- 401
           NVREL N ++R+ ++S  + +  D  +  LP  ++         +  +++RE ++R    
Sbjct: 356 NVRELQNIMQRLAVLSRENVIAADMLRHALPLDAEPADHAAPAGQLAQAVREWTKRQLGV 415

Query: 402 ----------DALLLVLE---------SHSGQVSTAAKELGVSRATMYRLLNKHNL 438
                     D LL V+E         S  G    AA  LG++R T+ + L  + L
Sbjct: 416 GLGQANPQLHDNLLAVIEPILLQETLASVDGNQIRAAGLLGINRNTLRKKLTDYGL 471