Pairwise Alignments

Query, 444 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 480 a.a., Nitrogen regulation protein NR(I) from Pseudomonas putida KT2440

 Score =  189 bits (480), Expect = 2e-52
 Identities = 118/315 (37%), Positives = 174/315 (55%), Gaps = 26/315 (8%)

Query: 142 GNMGLIGESMPMKRLRDQIKRIGPTDVSILIYGESGTGKETVAKAIHKTSSRAQKPFISV 201
           G +G+IG   PM+ +  +I+++ PTD ++LI GESGTGKE VA+A+H  S RA+ P ISV
Sbjct: 148 GEIGIIGSCQPMQDMYSKIRKVAPTDSNVLIQGESGTGKELVARALHNLSRRAKAPMISV 207

Query: 202 NCRAMSEKRLESELFG-----LGETEEGQQPFLLQADGGTLLLNDILTLPKSQQLNLLRF 256
           NC A+ E  +ESELFG           G+   +  ADGGTL L++I  LP   Q  LLR 
Sbjct: 208 NCAAIPETLIESELFGHEKGAFTGASAGRAGLVEAADGGTLFLDEIGELPLEAQARLLRV 267

Query: 257 LQEGTVETRQGVRA--VDVRILAANSSDIEKALIDGDFNEELYHYINVLRINVPSLKERA 314
           LQEG +     V++  VDVR++AA   D++     G F E+LY+ ++V+ + +P+L+ER 
Sbjct: 268 LQEGEIRRVGSVQSQKVDVRLIAATHRDLKNLAKAGQFREDLYYRLHVIALKLPALRERG 327

Query: 315 SDIVLLAKHFLQEYSKEYNAQARSFSDDAVRGLTRYHWPGNVRELMNQIKRVVLMSDT-- 372
           SD+  +A  FL   S         FS +A + +  Y WPGNVREL N ++R V++S++  
Sbjct: 328 SDVNEIANVFLARQSARIGRDDLHFSAEAEQAIRHYSWPGNVRELENAVERAVILSESAE 387

Query: 373 -------VVLDESQLD--------LPKRSDGRRSLKSIRERSERDALL-LVLESHSGQVS 416
                  + ++ S LD        L   + G  S +   + S  D     VLE       
Sbjct: 388 ISAELLGIDIELSDLDEDDILDNALVVANAGNASHEPTEDLSLEDYFQHFVLEHQDHMTE 447

Query: 417 T-AAKELGVSRATMY 430
           T  A++LGVSR  ++
Sbjct: 448 TELARKLGVSRKCLW 462