Pairwise Alignments

Query, 444 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., sigma-54-dependent Fis family transcriptional regulator from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  191 bits (486), Expect = 3e-53
 Identities = 113/311 (36%), Positives = 170/311 (54%), Gaps = 18/311 (5%)

Query: 145 GLIGESMPMKRLRDQIKRIGPTDVSILIYGESGTGKETVAKAIHKTSSRAQKPFISVNCR 204
           G IG S  M+R+   + ++  TD ++LI GE+GTGKE  A+A+H+ S RA   F  V+  
Sbjct: 151 GFIGVSPAMQRVYQTLDKVAATDANVLILGENGTGKEVAARALHRKSKRAGSVFEKVDLG 210

Query: 205 AMSEKRLESELFG-----LGETEEGQQPFLLQADGGTLLLNDILTLPKSQQLNLLRFLQE 259
           A+SE   ESELFG       + +E +   L  A GGTL L++I  L  + Q  LL  LQ 
Sbjct: 211 AVSETLFESELFGHAKGAFTDAKEERAGRLEAASGGTLFLDEIGNLSPALQAKLLTVLQS 270

Query: 260 GTVETRQGV---RAVDVRILAANSSDIEKALIDGDFNEELYHYINVLRINVPSLKERASD 316
             V  R G    R +D+R++ A +  + + + +G F ++L + IN + I++P L+ER  D
Sbjct: 271 RQV-IRLGTNKPRPIDIRLVCATNMPLYEMVREGSFRQDLLYRINTVEIHLPPLRERRED 329

Query: 317 IVLLAKHFLQEYSKEYNAQARSFSDDAVRGLTRYHWPGNVRELMNQIKRVVLMSDTVVLD 376
           I LLA HFL+ Y ++Y         D +R L  YHWPGN+REL + ++R V++ D   L 
Sbjct: 330 IKLLADHFLKVYRQKYGRPQLHLGADTMRRLNEYHWPGNIRELDHAMERAVILCDGNELH 389

Query: 377 ESQLDLPKRSDGRRSLKSIRERSERDALLLVLE---------SHSGQVSTAAKELGVSRA 427
                     +G++  + +   +E D  L  LE          HSG ++ AAKELG++R 
Sbjct: 390 PDDFYFAPSENGQQKKQGLESITESDYTLEALEKMMVQKALVKHSGNITHAAKELGITRT 449

Query: 428 TMYRLLNKHNL 438
            +YR + KH L
Sbjct: 450 ALYRRIEKHGL 460