Pairwise Alignments

Query, 444 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 470 a.a., Putative sensory histidine kinase YfhA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  206 bits (524), Expect = 1e-57
 Identities = 125/341 (36%), Positives = 190/341 (55%), Gaps = 10/341 (2%)

Query: 107 FFTAPIPDAQLLSTIGHQLGMLKLEKKVWPHFGSAGNMGLIGESMPMKRLRDQIKRIGPT 166
           + T P    +LL  I   L  L        H   A    ++  S  M  L  + + +  +
Sbjct: 111 YLTKPYDAKELLEKIAQALA-LGAPAHQNTHVDEAWRSEIVSRSNRMADLLAEARMVAQS 169

Query: 167 DVSILIYGESGTGKETVAKAIHKTSSRAQKPFISVNCRAMSEKRLESELFG-----LGET 221
           D S+L+ G+SGTGKE +A+AIHK S+RA +PFI+VNC A+ E  LESELFG       + 
Sbjct: 170 DASVLLRGDSGTGKEMLARAIHKASARANRPFIAVNCGAIPEALLESELFGHMKGAFTDA 229

Query: 222 EEGQQPFLLQADGGTLLLNDILTLPKSQQLNLLRFLQEGTVETRQGVRA--VDVRILAAN 279
               +     ADGGTLLL++I  +P + Q+ LLR LQE  V      ++  V+VRI++A 
Sbjct: 230 VANHKGLFQAADGGTLLLDEIGDMPPALQVKLLRVLQERAVRPLGSSQSLPVNVRIISAT 289

Query: 280 SSDIEKALIDGDFNEELYHYINVLRINVPSLKERASDIVLLAKHFLQEYSKEYNAQARSF 339
             D+E A+  G F E+LY+ +NV+ + +P+L ER  DI LLA HFL   + +Y  ++  F
Sbjct: 290 HRDLEDAMAAGQFREDLYYRLNVVTLTLPTLAERREDIALLANHFLARLAAKYGKRSSGF 349

Query: 340 SDDAVRGLTRYHWPGNVRELMNQIKRVVLMSDTVVLDESQLDLPKRSDGRR--SLKSIRE 397
           + +A++ LT   WPGNVR+L N +++V  +S T ++  + +    R+      S    ++
Sbjct: 350 APEALKALTMAAWPGNVRQLYNVVEQVCALSTTPLVSLALVQRALRTPSVEVLSFADAKQ 409

Query: 398 RSERDALLLVLESHSGQVSTAAKELGVSRATMYRLLNKHNL 438
           R ER+ L+ +L+   G V+ AA+    +R   YRLL KH L
Sbjct: 410 RFEREYLVDLLKMTDGNVADAARLAQRNRTEFYRLLQKHAL 450